Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2311 |
Symbol | flgI |
ID | 4604561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2777392 |
End bp | 2778483 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639781708 |
Product | flagellar basal body P-ring protein |
Protein accession | YP_928186 |
Protein GI | 119775446 |
COG category | [N] Cell motility |
COG ID | [COG1706] Flagellar basal-body P-ring protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.373446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATCA AGGTTCTGCT TGCCGTGGCC TTGCTGGCCA TGACAGTGCC GGTTAAAGCC GAGCGCATTA AAGATATCGC CGCCGTTCAG GGTGTGCGCA GTAACCAATT GATTGGTTAT GGATTGGTGG TGGGTTTGCC GGGCACGGGT GAAAAGGCAA ATTACACAGA GCAAACTTTT ACCACCATGC TGAAAAACTT CGGCATTAAT TTGCCGACCA ACGTAAAGCC CAAGATTAAA AACGTGGCCG TAGTGGCAGT GCATGCCGAT ATGCCACCTT TCATCAAACC CGGCCAGACG CTGGATGTCA CAGTGTCCAG CATAGGCGAG GCCAAGAGTC TGCGTGGTGG AACTCTGCTG CAAACCTTCC TTAAAGGGGT GGATGGCAAC ATCTACGCCA TTGCGCAGGG CAGCATGGTG GTGTCCGGTT TCAGTGCCGA AGGGCTTGAT GGATCCAAGG TTATTCAGAA TACCCCAACA GTGGGCCGTA TCCCCAACGG CGCTCTGGTG GAACGGGCCG TGCCGTCTGC TTTTGCCCAT GGAGACTTCC TTACCTTTAA CCTGCACCGA GCCGACTTCT CTACCGCCAA GCGGATGGCC GATGCCATTA ACGATTTGTT GGGGCCGGAA ATGGCTCGCG CACTCGATGC AGCCTCGGTT CAGGTGTATG CCCCACGGGA TGCCTCACAG CGGGTGTCGT TTCTCGCGAC ACTGGAGAAC GTCGAAGTTG AGCCTGCGGA TGAGTCGGCC AAGGTGATTG TCAACTCGCG CACCGGCACC ATAGTCGTTG GTCAGAATGT GAAGTTATTA CCAGCAGCTG TGACCCATGG TGGTCTGACA GTGACCATTG CTGAAAATCA GCAGGTGTCC CAACCCAATG CTCTTGCCGG TGGCGATACC GTGGTAACCA ACCAAAGCAC CATAGATGCG TCTCAGGCCA ATAGCCGTAT GTTCCTGTTT AATCCGGGAA CCAGCTTGGA TGAATTGGTC AGGGCCGTGA ATTTGGTTGG TGCTGCACCT TCAGATGTGC TTGCGATCCT TGAGGCGTTA AAAATGGCAG GCGCCTTGCA TGGTGAGCTT ATCGTCATTT GA
|
Protein sequence | MKIKVLLAVA LLAMTVPVKA ERIKDIAAVQ GVRSNQLIGY GLVVGLPGTG EKANYTEQTF TTMLKNFGIN LPTNVKPKIK NVAVVAVHAD MPPFIKPGQT LDVTVSSIGE AKSLRGGTLL QTFLKGVDGN IYAIAQGSMV VSGFSAEGLD GSKVIQNTPT VGRIPNGALV ERAVPSAFAH GDFLTFNLHR ADFSTAKRMA DAINDLLGPE MARALDAASV QVYAPRDASQ RVSFLATLEN VEVEPADESA KVIVNSRTGT IVVGQNVKLL PAAVTHGGLT VTIAENQQVS QPNALAGGDT VVTNQSTIDA SQANSRMFLF NPGTSLDELV RAVNLVGAAP SDVLAILEAL KMAGALHGEL IVI
|
| |