Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2289 |
Symbol | fliN |
ID | 4604539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2754363 |
End bp | 2754737 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639781686 |
Product | flagellar motor switch protein |
Protein accession | YP_928164 |
Protein GI | 119775424 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.912954 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCG AAGACGATTG GGCCGCAGCA ATGGCCGAGC AGGCCCTGGA AGAAGCCAAG GCCGCCGAGT TTGAAGAGCT GAAAGATGAG ACCAAACCCC TGAGCAGTGA GGAGGCCGCC AAGCTGGATG CCATTTTGGA CATTCCAGTG ACCATTTCTA TGGAAGTGGG GCGCAGCTAT ATCAGCATCC GCAACCTGTT GCAGCTCAAT CAGGGCTCAG TGGTGGAGCT CGACCGCGTG GCCGGTGAGC CGCTGGATGT GATGGTTAAC GGTACTCTGA TAGCCCACGG CGAAGTGGTG GTGGTAAACG ACAAGTTTGG TATTCGCCTC ACTGACGTGA TAAGTCAAAC CGAGCGAATT AAAAAGCTCA AGTAA
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Protein sequence | MNTEDDWAAA MAEQALEEAK AAEFEELKDE TKPLSSEEAA KLDAILDIPV TISMEVGRSY ISIRNLLQLN QGSVVELDRV AGEPLDVMVN GTLIAHGEVV VVNDKFGIRL TDVISQTERI KKLK
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