| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2283 |
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| Symbol | flhA |
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| ID | 4604533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2748828 |
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| End bp | 2750927 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781680 |
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| Product | flagellar biosynthesis protein FlhA |
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| Protein accession | YP_928158 |
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| Protein GI | 119775418 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
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| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.740103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTCA TGGGCCAACT GGGTCAAATC AAAAAAATGA AACCGGCAAA CCTGCAGGGG
CTTGGTACCC CGGCATTGGT GCTTGCGGCC CTGGCAATGA TAGTGCTGCC CATGCCGGCA
TTTCTGCTCG ATATCCTGTT TTCATTCAAC ATTGCTCTCG CGCTGGTGGT ACTGTTGGTT
GCCATCTATA CCAACAGGCC CCTGGATTTT GCTGCTTTCC CGACAGTTCT GCTGGTGGCA
ACGCTGCTCA GATTGGCGCT GAACGTCGCC TCTACCCGTG TTGTACTGCT CGAAGGCCAC
AACGGCGCAG ATGCCGCCGG TAAGGTGATT GAAGCCTTCG GCTCTGTGGT GATTGGCGGA
AACTACGCCG TGGGTCTGGT GGTGTTTTTA ATTCTTATCA TCATCAACTT CGCCGTGGTC
ACCAAGGGTG CCGGACGCAT TTCCGAGGTG AGCGCCCGCT TCACTCTGGA CGCCATGCCC
GGTAAACAGA TGGCCATCGA TGCTGACCTT AACGCCGGGC TTATCAACCA GGAACAGGCC
CGTACCCGCC GCGCTGAAGT GACCAAGGAA GCCGACTTTT ACGGCGCCAT GGATGGTGCG
TCCAAGTTTG TGAAAGGCGA CGCCATCGCC GGGATCATGA TCCTGGTGAT TAACATCCTC
GGTGGCTTTG TTATCGGTAT GGTGCAGCAC GATCTGGCCT TTATGGATGC AGTGGAGATT
TATACCCTGC TGACCATTGG TGACGGTCTG GTGGCCCAGA TCCCGGGGCT TCTGCTTTCC
ATTGCCGCAG CGCTGATGGT GACCCGTCAG AATGAAGAAG GCGACATGGG TGGCATGGTG
ATGAGTCAGA TGTTTGACAA TCCCAAGTCG CTGGCCATCG CCGCAGGGGT GCTCTTTATT
ATGGGCATAG TACCCGGCAT GCCCCATCTG GCTTTTTTAA CCTTCGCCGT GGCAACTGGT
GCCGGCGCCT ATTTCCTGCA TAAACGCATC GAGAAGCGTA AGCAGCAGGC CCTTGAAGCG
GCGGCAAGCG GCAGTGTTGA GAAGCTCGAT AATTCACCCA AGGAGCTCGG TTGGGACGAT
GTGCGCCATG TGGATACCAT CGGACTTGAG GTGGGCTACC GCCTGATCCC GCTGGTGGAC
AAGGGGCAGG GGGGCGAGCT CCTGTCCCGT ATCAAGGGTG TACGTAAGAA ACTGTCGCAG
GAGCTGGGCT TTTTGGTGCC CGCAGTGCAC ATTCGCGACA ACCTGGATCT TGCCCCCAGC
ACCTATCGCA TCTCACTGAT GGGCGTAGTG GTGGGTGAGG CTGAAATTCG CCACGATTGT
GAACTGGCCA TCAACCCCGG GCAGGTGTTT GGGCAACTCG ATGGCGTAAC GACCCGGGAC
CCGGCTTTCG GACTCGAAGC GGTTTGGATT GCACCTGAGC TGCGTGAGCA TGCCCAGACG
CTGGGTTACA CCGTGGTTGA TGCAGCCACT GTGGTGGCAA CACACATCAG TCAGACTCTC
AGCAATAATG CCTCCAAGTT ACTGGGTTAT GAGGAAGTAC AGCAGCTGCT GGATATTCTT
GCCAAGCATT CGCCCAAGCT TGTTGACGGC TTTATCCCCG ATGTGATGTC CCTCGGCACC
GTGGTGAAAG TGATGCAAAA CCTGCTTAAT GAAGGGGTGT CGGTGCGCGA CCTGCGGACC
ATAGTGCAGA CACTGCTGGA GTATGGTACC AAGTCCGGTG ACACCGAAGT ACTCACAGCG
GCGGTGCGTA TTGCTCTTAA ACGTATGATT GTTCAAGAAA TAGCCGGGCC AGAGGCCGAA
ATCCCTGTCA TAACTTTGGC ACCAGAGTTG GAACAGATGT TGCATCAATC GATGCAGGCT
TCCGGTGGCG ATGGTCCCAA CATCGAACCC GGATTGGCCG AGCGGATGCA ACAGTCACTG
GCTGACGCCG CTCAGCGGCA GGAAATGGTG GGTCAACCCG CCATACTGCT GACCTCGGGA
ATGCTGCGTT CGACCCTGTC GCGCTTTGTG AAATACACCA TTCCCAACCT GAGGGTGATT
TCCTATCAGG AAATTCCCGA TGAGAAGCAG ATAAGAATAG TGTCAGCCGT GGGCCAGTAA
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| Protein sequence | MDVMGQLGQI KKMKPANLQG LGTPALVLAA LAMIVLPMPA FLLDILFSFN IALALVVLLV
AIYTNRPLDF AAFPTVLLVA TLLRLALNVA STRVVLLEGH NGADAAGKVI EAFGSVVIGG
NYAVGLVVFL ILIIINFAVV TKGAGRISEV SARFTLDAMP GKQMAIDADL NAGLINQEQA
RTRRAEVTKE ADFYGAMDGA SKFVKGDAIA GIMILVINIL GGFVIGMVQH DLAFMDAVEI
YTLLTIGDGL VAQIPGLLLS IAAALMVTRQ NEEGDMGGMV MSQMFDNPKS LAIAAGVLFI
MGIVPGMPHL AFLTFAVATG AGAYFLHKRI EKRKQQALEA AASGSVEKLD NSPKELGWDD
VRHVDTIGLE VGYRLIPLVD KGQGGELLSR IKGVRKKLSQ ELGFLVPAVH IRDNLDLAPS
TYRISLMGVV VGEAEIRHDC ELAINPGQVF GQLDGVTTRD PAFGLEAVWI APELREHAQT
LGYTVVDAAT VVATHISQTL SNNASKLLGY EEVQQLLDIL AKHSPKLVDG FIPDVMSLGT
VVKVMQNLLN EGVSVRDLRT IVQTLLEYGT KSGDTEVLTA AVRIALKRMI VQEIAGPEAE
IPVITLAPEL EQMLHQSMQA SGGDGPNIEP GLAERMQQSL ADAAQRQEMV GQPAILLTSG
MLRSTLSRFV KYTIPNLRVI SYQEIPDEKQ IRIVSAVGQ
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