| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2254 |
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| Symbol | |
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| ID | 4604504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2717169 |
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| End bp | 2718371 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 639781651 |
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| Product | hypothetical protein |
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| Protein accession | YP_928129 |
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| Protein GI | 119775389 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00102116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00258376 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAATAACA TCTTTTATTA CTCATCAACC CTTGTTAAAG CACTATCCTC ATATCTTTTG
GTCTTTATTA TATCGAATAA CTATACATCT GAAGAATTGG GAGTATATTT TTATTATTTG
GCTATAGCCA GTTTTCTCTC TGTAGCAATA CCACTAGGTA TCAATTCATA TATTGAAAGA
TTGTCATATA GCAATAAGAA AGCGAAATAC ATTTTTTCTT TTGCTTTTAG TCTTGTATTT
CTTAGTACAG TTATTTTTAC TTTAATTTTA TCGATTTTTT CCATCTTTTA TGAATCTGGT
GACATCCGAC TGATAATTTT TGTTGTAGGA CTACTATCGT TTTATAAAGC CATCGAAATT
TTATTAGAGG CTGTTCTCAT AGTCTTACAA AAATATAAAG CAATATTCGT ATATTGGATA
GTCGTATTAT CGCTCTATTT TGTTTTAATG TGTATTTTCT GGACTCAAGA CTTAATAATG
AAAATTGAAA CTTTAATCAC TATCATTTCA ATTTTTATGG TTGTAGTTTG CATACTAATA
TCAAGGTCTA CAGGTGCGCT AATCTTTCTT GATGTTAGTC AGTCACTATT TAATAAGTTT
AAATATGTCA ACCTAAGCTT TACATGGAAT ATGTTTTTTG TGTCACTACT TAACACGGGT
ATTGCTGTTG TAGACAGAAT CATATTAGGA GCAATGCAAT CTAAAGAAGT CTTAGCGATC
TATTCAGTAT GTTACATGAT TGTTTTTTCA ATACATCGAT TCTTTTCAAC ACCTTTTTGT
TTGAAGATTG CTCAAAGTTT GTATCGTTCA CATGACTATC GTTCATATAG GCAAAACGTA
TTAAGTGGAT TGTTCTATTT ATTGCTTTTT CTGTCCTTAA TTATACTAAC ATTCTACGCA
TATTTTTTTA AAATATTCAG CATAGATAGA CCATCTATCT TCTTTCTTTT GGTATTGGCT
TTATCAGTTA TAGTTTTTTT TATTTATACA TCTTTGGTAA CAATACTAAA ATTGAAATAT
ATGCAAGATA CGATTCTTAA AGTAAATATA TTCGTTTTTT TATCAAACAT AATATTAAAT
TTATCTCTTG TCCCCTATTT TTCTTTGCTC GGTGCTGCAT TCTCTACATT AATAACCTAT
AGTTTGGGCT TGATATATTA TTCTTTAGTT ATTTTCAAAT TGGAGAAATG TTTTGGAGAA
TAA
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| Protein sequence | MNNIFYYSST LVKALSSYLL VFIISNNYTS EELGVYFYYL AIASFLSVAI PLGINSYIER
LSYSNKKAKY IFSFAFSLVF LSTVIFTLIL SIFSIFYESG DIRLIIFVVG LLSFYKAIEI
LLEAVLIVLQ KYKAIFVYWI VVLSLYFVLM CIFWTQDLIM KIETLITIIS IFMVVVCILI
SRSTGALIFL DVSQSLFNKF KYVNLSFTWN MFFVSLLNTG IAVVDRIILG AMQSKEVLAI
YSVCYMIVFS IHRFFSTPFC LKIAQSLYRS HDYRSYRQNV LSGLFYLLLF LSLIILTFYA
YFFKIFSIDR PSIFFLLVLA LSVIVFFIYT SLVTILKLKY MQDTILKVNI FVFLSNIILN
LSLVPYFSLL GAAFSTLITY SLGLIYYSLV IFKLEKCFGE
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