| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2247 |
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| Symbol | |
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| ID | 4604497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2711624 |
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| End bp | 2712190 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639781644 |
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| Product | capsular polysaccharide synthesis protein |
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| Protein accession | YP_928122 |
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| Protein GI | 119775382 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.436876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00758225 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTACTCAA AGATAATTAA GCGTATTTTC GATTTATTTA TTGTTTTGTT TGCAACAGTT
TTTTTGTTTC CTTTACTGAT TGCTGTTTGC TTTTTAATTA AGGTCTTTGA TCCCGGTCCA
ATTATTTTCA AGCAAAAACG CATTGGTCGG AATGCGAAAG AATTCGATTT TTATAAATTT
AGAAGCATGC CGGTTAACAC AGGGGACATT CCGTCCGATA AATTGGGCTC AATAGACATT
ACTTGGGTTG GTAGGCTTAT TAGAAGGACT AATCTTGATG AATTACCACA GTTATTTAAT
GTCTTGAAAG GTGATATGAG TATTGTTGGT CCACGTCCAC CAATTGTATC TCAGCGGCAA
TTGGTAGAGC TTAGAAAGCA GAATGGCGCA ATAGCGTGTA GACCAGGTTT GACTGGATTA
GCTCAAGTTA GCGCGTTTGA CGGGATGACA GTTGAGCAGA AAGCTGCTTT TGATGCTGAA
TATGCTAGAA AGGTCTCGTT TTTAACTGAT GTTAAAATAA TCCTTCGTAC ATTCACTTAT
TTGCTTAAGC CGCCACCTGT TTATTAA
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| Protein sequence | MYSKIIKRIF DLFIVLFATV FLFPLLIAVC FLIKVFDPGP IIFKQKRIGR NAKEFDFYKF
RSMPVNTGDI PSDKLGSIDI TWVGRLIRRT NLDELPQLFN VLKGDMSIVG PRPPIVSQRQ
LVELRKQNGA IACRPGLTGL AQVSAFDGMT VEQKAAFDAE YARKVSFLTD VKIILRTFTY
LLKPPPVY
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