| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2234 |
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| Symbol | |
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| ID | 4604484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2698333 |
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| End bp | 2698941 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781631 |
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| Product | uncharacterized lipoprotein NlpE involved in copper resistance |
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| Protein accession | YP_928109 |
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| Protein GI | 119775369 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG3015] Uncharacterized lipoprotein NlpE involved in copper resistance |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAGCA TCGGAAAACA TAGCGACTTC ACCCCATCCT GCGTATCGCG TATGCTGGGT
GATCTCCACT TTGTTAATCA GGGTACAGCC ATGAAATTCT CCCGCTATTT TTTCAGCTTA
CTCACGACAC TGCCGCTGTT GGCCTGCACT CAGGTAGAAG CCCCAGTTCC AGAGGCGCTT
TCGCAATCAA CAGGTCACAC TGCTGGGGCG GCACAACCTC AGGAAAGCGT AATCGGCGGA
TCCCTGCCCA TTGGAGACAG CAGCCGTACT TCGCTTGATT GGCAAGGCAG CTATGAAGGC
GTGGTTCCCT GCGCCAGTTG TGAAGGTATC AAAACCCGAC TGACATTGAA TAACGATGGA
ACTTACCTGC TGCAAAGCCA ATATCTGGGC AAAGAACAGG ATGGTAAAGA ACCCAAGGTT
TTTGAGGAGC AAGGCAAGTT CAGCTGGAAT GCCAGCGGTG GTGCCATCCA GCTTGAAAAC
GGCGCCTGGT ATCAGGTAGG AGAGAATCAA CTGTTTATGC TGGACAGGGA AGGAAAGCGC
ATAACAGGCG TTCTGGCAGG GCACTATCGC CTGCTGAAAA AGCAGAGCGC TTTGCTGCCT
AGATTCTAG
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| Protein sequence | MFSIGKHSDF TPSCVSRMLG DLHFVNQGTA MKFSRYFFSL LTTLPLLACT QVEAPVPEAL
SQSTGHTAGA AQPQESVIGG SLPIGDSSRT SLDWQGSYEG VVPCASCEGI KTRLTLNNDG
TYLLQSQYLG KEQDGKEPKV FEEQGKFSWN ASGGAIQLEN GAWYQVGENQ LFMLDREGKR
ITGVLAGHYR LLKKQSALLP RF
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