Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2233 |
Symbol | |
ID | 4604483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2697441 |
End bp | 2698196 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639781630 |
Product | putative hydrolase |
Protein accession | YP_928108 |
Protein GI | 119775368 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1387] Histidinol phosphatase and related hydrolases of the PHP family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTTC CGGTCGATAC TCACAGCCAC ACAGTGGCGT CCACCCATGC CTACAGTACC ATCCATGATT ATCTGGCGGT GGCGAAGGAA AAGGGCATTC GCCTGTTTGC CACCACGGAC CATGGTCCGG CGATGAAAGA TGCACCGCAT TTCTGGCATT TTGTGAATTT ACGTGTGCTG CCCAGAATAT GGAATGGGGT GGGGATTCTG CGGGGTATTG AAGCCAACAT CATGAATGAA AAAGGCGAAA TTGATTATTT CGGCGAGTAT CTGTCGGAGC TTGATCTGGT GCAGGCCGGA TTTCATGAGC CTGTGTTTGC CCCCGCCGAC AGGCTTACCC ACACCCGCGC CATGATAGCC ACCATGGAGT CGGGGCTGGT AGATATCATC ACGCATCCGG GTAACCCGGC GTACCCCATT GATGTGGAGG CGGTGGTCGG TGCTGCCAAG GCATGCAATG TGGCGCTGGA AATCAACAAC TCTTCTTTTA CGGCTTCCCG TAAGGGCAGC GAAGAGAATT GTCTTGCCAT AGCGCGAATG GCCACAAAAT TGGACGCCCA ATTGGTGATG GGATCTGATG CCCACGTTGC CTTTGATTTG GGGGGATTTG ACCGCTCGCT GGCTATTGTG GATGCCGCCG ATTATCCCCG CCAGCGGCTC CTTAATGAGA GCCCTATGGC GTTATTGCAT TTTTTACAGC AACGGGGCCA TCAACATCTT GACGAACTCA TCCGCTATTT CAGGCCGGTG CTCTGA
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Protein sequence | MQFPVDTHSH TVASTHAYST IHDYLAVAKE KGIRLFATTD HGPAMKDAPH FWHFVNLRVL PRIWNGVGIL RGIEANIMNE KGEIDYFGEY LSELDLVQAG FHEPVFAPAD RLTHTRAMIA TMESGLVDII THPGNPAYPI DVEAVVGAAK ACNVALEINN SSFTASRKGS EENCLAIARM ATKLDAQLVM GSDAHVAFDL GGFDRSLAIV DAADYPRQRL LNESPMALLH FLQQRGHQHL DELIRYFRPV L
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