Gene Sama_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2233 
Symbol 
ID4604483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2697441 
End bp2698196 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content54% 
IMG OID639781630 
Productputative hydrolase 
Protein accessionYP_928108 
Protein GI119775368 
COG category[R] General function prediction only
[E] Amino acid transport and metabolism 
COG ID[COG1387] Histidinol phosphatase and related hydrolases of the PHP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTTC CGGTCGATAC TCACAGCCAC ACAGTGGCGT CCACCCATGC CTACAGTACC 
ATCCATGATT ATCTGGCGGT GGCGAAGGAA AAGGGCATTC GCCTGTTTGC CACCACGGAC
CATGGTCCGG CGATGAAAGA TGCACCGCAT TTCTGGCATT TTGTGAATTT ACGTGTGCTG
CCCAGAATAT GGAATGGGGT GGGGATTCTG CGGGGTATTG AAGCCAACAT CATGAATGAA
AAAGGCGAAA TTGATTATTT CGGCGAGTAT CTGTCGGAGC TTGATCTGGT GCAGGCCGGA
TTTCATGAGC CTGTGTTTGC CCCCGCCGAC AGGCTTACCC ACACCCGCGC CATGATAGCC
ACCATGGAGT CGGGGCTGGT AGATATCATC ACGCATCCGG GTAACCCGGC GTACCCCATT
GATGTGGAGG CGGTGGTCGG TGCTGCCAAG GCATGCAATG TGGCGCTGGA AATCAACAAC
TCTTCTTTTA CGGCTTCCCG TAAGGGCAGC GAAGAGAATT GTCTTGCCAT AGCGCGAATG
GCCACAAAAT TGGACGCCCA ATTGGTGATG GGATCTGATG CCCACGTTGC CTTTGATTTG
GGGGGATTTG ACCGCTCGCT GGCTATTGTG GATGCCGCCG ATTATCCCCG CCAGCGGCTC
CTTAATGAGA GCCCTATGGC GTTATTGCAT TTTTTACAGC AACGGGGCCA TCAACATCTT
GACGAACTCA TCCGCTATTT CAGGCCGGTG CTCTGA
 
Protein sequence
MQFPVDTHSH TVASTHAYST IHDYLAVAKE KGIRLFATTD HGPAMKDAPH FWHFVNLRVL 
PRIWNGVGIL RGIEANIMNE KGEIDYFGEY LSELDLVQAG FHEPVFAPAD RLTHTRAMIA
TMESGLVDII THPGNPAYPI DVEAVVGAAK ACNVALEINN SSFTASRKGS EENCLAIARM
ATKLDAQLVM GSDAHVAFDL GGFDRSLAIV DAADYPRQRL LNESPMALLH FLQQRGHQHL
DELIRYFRPV L