Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2228 |
Symbol | |
ID | 4604478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2691526 |
End bp | 2693793 |
Gene Length | 2268 bp |
Protein Length | 755 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639781625 |
Product | decaheme cytochrome c |
Protein accession | YP_928103 |
Protein GI | 119775363 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.236086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAA ACTACAACAG ATCACTGCTG ACGATAGCAC TCCTCAGTGC TCTGACCCTT ACCGCATGCG GCGACGGTAA AGATGGTCAG GACGGCGCAC CTGGTACACC GGGCACTCCC GGTACCCCAG GCGAACCTGG TAAACCAGGT ACCCCAGCCG GCTCGTTCGT AACCAGTGCA GATAAAGCCG CCGATGTGAC TTTCGAAATA CTCCCAGCCG ACATCAACGT GGCTGGTTCA GGTGACTTTG CGATTAAATT CAAAGCCATG GGCAAGAACG CTCAAGGCAG TTCAGTCCCC TTCTCCGGAC TGGATATGGT CTCGCTCTAT TCAATGACCC TGGCGGCCAA CAGCTCTGGC AGCGGCGCGC CACTGGAATG GGTGAACAAT GCCATGGTGC AGGACCTGGG CTCTTCCATG TACTGTACTC TTACTGGCAC CTACAGCTCC CGTGGACAAA CAGGTAATGC GTGTATTCTG GTGGAAGATG CCGACGAGCC CGGCACATAC ACAGGTACCT GGACCCATGA AGGCGCAGCG CCCATCATGA ACCCCAATGA TGACCTCAAT GCCACTCACC GCTTGTTCCT GCGCGCATAT AACGTGAAGG ACAGCGGTGG TACTGCGCTC TCTGACAAGG TGCTCTCTGA CCGACTGGAC TACGTGCCAG CCACAGGTGC CATCGTTGAA GCCACAGGCA AAGACACTGT GACCGACGCA GCCTGTATCA GCTGTCACGG CAACGTGGAC GGCCGTATTG CGAATATAGG CGCCCACCAC AATTATCAAA GTGTGGAAAA CTGTATCGCC TGCCACAACC CCGACAACCA GCCCGATGAA GATCAACTCG CCGAAGGTTG GCTGTTTGAT TTCGGCCCCA TGATCCACCG TATCCACGCC GGACACCATA TCAGTGACTT CCTCTCAGGC GAAGCCAAGG AATACTTTGG CGAACTGGGT TTCCCCGGCG AGCTGCGTGA ATGTACCAGT TGCCACAATA ACGGTCCTTC CTGGAGCAAT AACCTGTACC GTCAGGCGTG CGTTGGCTGT CACATTAACG TTAACTTTGA AACCGGTGAA GGCCACTCTG ATTTCGACTT GGCACAAGCC GACGATACTC AGTGTAAATC CTGTCACGCC AGTGGCAGCT TGAGCCCAGC GATTGCGCAC AAGGTAGGCA ACAGGGCAAT TGAGCAAGAA CAAGTCGTGC TTGATTTCCA AGGTGTGACA GTGACTGACA ACGGCGACGG CACCAGCGCA CTCACTGTAA AAACTAAGGT GACTATCAAT GGTGCGACAC CTGCCGATGG CACTATGCTG GATCCTTACA TGCCACGTCT GTCTACCGGT CTGCTAATTG GTAATGTTGA CACAGACGGC AATCCAATAC GTGGATTGGG TATGCCTGTC AATGGCGTAG CAATGACAGG TGGTGTCCTG ACAACGACCA AGAGCTTCCC GTCTTCGCGT CTGACAGGCT CTCTCTACGT GACTGCAGAA GTGATGGTAT GCGGAGCGGG CGGTAAAGCC GTGATGTGTG CCAATGGCGA CTACACAGAA GTATCTGCCA GCGCCCATGT TAAATACTAC AATCTGGATG ATCCGGACGC GGCAGCACTG CAAGCACGAA TGAGCGACTT GGACCGCGTC ACCGTGAGCG AAGCCAAATG TAACAGCTGT CACAATAACC TCACTCACAT TAAGGCACCA CGCCACGGTG TGAGCGAGTT TACCCAGTGT ATGGATTGTC ACAACAACAG ATACCCTGGT TCATACCATG GCAATGTTGA ATACAACACT GGCGAAGTTG ATGCCGATGG TAACCCAATC ATGGCAACTG TTGAAGGGTT AACCTACAGC AACCGCGACC TCATGACAGT GGCACACCGC TTCCACTCTG GAACATTCGG TGGTGGCATT TACCTCGATA AAAACATGGA AACTGTTGGT TACCCTGCCC CAGCGACAGA CTGCAGCGTA TGTCACAAAG ACGATGCCAA CTTCTTCGCC AACGACGGTG GTTTAACCTC AGGTAAGCGT TCAATTCAGG TCACCTCCAC AGAGTACATT ACCCCTGTGG CCGAAGCCTG CCGTACTTGC CACGCTCACT CAGATGGCGC CGCACTGGCC CACTTCAAGA GCAATGGTGC TTACGTTCAG GGTGAACCTG CAACCACCAG CAACCTGCCG GTAGAAAGCT GCGCCACCTG TCACGCAGAG GGTAAAGCTT ACGGTATCGA TAAGGTGCAC GCAGAGGCCT CTCACTAA
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Protein sequence | MMKNYNRSLL TIALLSALTL TACGDGKDGQ DGAPGTPGTP GTPGEPGKPG TPAGSFVTSA DKAADVTFEI LPADINVAGS GDFAIKFKAM GKNAQGSSVP FSGLDMVSLY SMTLAANSSG SGAPLEWVNN AMVQDLGSSM YCTLTGTYSS RGQTGNACIL VEDADEPGTY TGTWTHEGAA PIMNPNDDLN ATHRLFLRAY NVKDSGGTAL SDKVLSDRLD YVPATGAIVE ATGKDTVTDA ACISCHGNVD GRIANIGAHH NYQSVENCIA CHNPDNQPDE DQLAEGWLFD FGPMIHRIHA GHHISDFLSG EAKEYFGELG FPGELRECTS CHNNGPSWSN NLYRQACVGC HINVNFETGE GHSDFDLAQA DDTQCKSCHA SGSLSPAIAH KVGNRAIEQE QVVLDFQGVT VTDNGDGTSA LTVKTKVTIN GATPADGTML DPYMPRLSTG LLIGNVDTDG NPIRGLGMPV NGVAMTGGVL TTTKSFPSSR LTGSLYVTAE VMVCGAGGKA VMCANGDYTE VSASAHVKYY NLDDPDAAAL QARMSDLDRV TVSEAKCNSC HNNLTHIKAP RHGVSEFTQC MDCHNNRYPG SYHGNVEYNT GEVDADGNPI MATVEGLTYS NRDLMTVAHR FHSGTFGGGI YLDKNMETVG YPAPATDCSV CHKDDANFFA NDGGLTSGKR SIQVTSTEYI TPVAEACRTC HAHSDGAALA HFKSNGAYVQ GEPATTSNLP VESCATCHAE GKAYGIDKVH AEASH
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