| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2220 |
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| Symbol | |
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| ID | 4604470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2683698 |
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| End bp | 2685236 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781617 |
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| Product | transcriptional regulatory protein TyrR |
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| Protein accession | YP_928095 |
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| Protein GI | 119775355 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTGG AAGTGAGTTG TCAGGACAGG GTTGGGCTCG CCAAGGATAT TCTTATCGTA
CTGGAAAAGT ACGGTATCAA TTTGCTTGCC ATCGATGCCA GTAACCGGGG GTTCCTGTAT
TTCCAGTTTG CCGAAGTCAG CTTCGATACC TTGAGTGCCC TGATGCCGCA GATTAGAAAG
GTCGAGAGTG TGCACGACGT GCGTACCGTG GCCTTTATGC CGTCAGAGCA GGAACACTAT
GCGCTGAAAA CCCTGCTAAG AACCCTGCCA GACTCGGTAT TTTCCATCGA TGTGAAGGGC
CGGGTGCGCA TCGTCAACGA ATCGGCCTTG ATGACCCTTG GTATGAAAGA GCACGAGGTG
GTGGAAGAAT CTTTGAACCA CTGGGTCCAG GGTTTCAGCT TTGGGCGCTG GCTCAGTGAA
AGCCAGGTAC TTGCCCAGGC AACCCGTGTC CACATAGGTC AGAACGAATA TCTGGCGGAG
ATGCTGCCCA TTTACCTGCC CGATGAAAAT GACAAGAGCA TTCTCGCCGG TGCCGTGGTG
TCGCTTAAAT CCCCCGCCCG GGTTGGCAAG CAGTTCAATG CCCTGCAAAA CCAAACCACA
GGCTTTGAAA ATGTACTGGC CGTAAGCGAT AAGATGAAAG AAGTGCTCAA ACAGGCCAAA
CGCATGGCAC AACTGGACGC GCCCTTACTC ATCACAGGTG AAACCGGCAC CGGCAAAGAA
TTGATGGCCA GAGCCTGCCA TGATGCCAGT ATGCGCCGTG AGCGCCCCTT TATTGCCATC
AACTGTGCCG CCTTGCCCGA CAGTGCGGCA GAGGAAGAAC TGTTTGGTTT TGTGCGTGAT
GGTCACATCG TCAAGCGCGG TCTGTTCGAA GAGGCCAAGG GGGGCAGCGT ATTCCTCGAC
GAAATCGCCG AAATGTCCAA AGCGGCTCAG GTGAAACTGC TGCGACTGCT GACGGAAGGT
TCTTTCAGGC GCATTGGTGG GGATGAAGAG GTGAGGGCCG ATGTGCGCAT CATCTGCTCC
AGCCAGAAAA ATCTTGCTGA ACTGTGCCAG ATGGGTGAGT TTCGCGAAGA CCTTTACTAT
CGTATCCACG TACTTTCCTT CCACATGCCT TCCCTACGGG AGCGTAAGGT GGACATTATT
CCGCTTACCG AAATGTTCCT TGAGCATTAC AGTCAGCAAC TCTCCAGCCC CATGCGGCGG
ATTTCCCCCA ATTGTCGTGA TCATTTGCTT ACCTACGCCT GGCCGGGCAA TGTGCGTCAG
TTGAAAAACG CGGTGTTCCG CGCCGTGTCT ATGTGGGATG GTTCGGCAGA GCTCACGGTT
GAGCAGCTTA AATTGCCGTC TTACGCTGAA GGCTTTGGCT ACTTTGATAA CCAGTTCGAA
GGCACTCTGG ACGAAGCCAT GCGTCAGTTT GAGTCCAGCT TGCTGCGACG CCTTTATCCA
GCTTACCCCA GCACCCGCCA GCTGGCGAAG AAGTTAGGTG TAAGCCACAC GGCCATCGCC
AACAAGTTGC GGGAATATAA GATAAGTAAG AAGCGCTGA
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| Protein sequence | MRLEVSCQDR VGLAKDILIV LEKYGINLLA IDASNRGFLY FQFAEVSFDT LSALMPQIRK
VESVHDVRTV AFMPSEQEHY ALKTLLRTLP DSVFSIDVKG RVRIVNESAL MTLGMKEHEV
VEESLNHWVQ GFSFGRWLSE SQVLAQATRV HIGQNEYLAE MLPIYLPDEN DKSILAGAVV
SLKSPARVGK QFNALQNQTT GFENVLAVSD KMKEVLKQAK RMAQLDAPLL ITGETGTGKE
LMARACHDAS MRRERPFIAI NCAALPDSAA EEELFGFVRD GHIVKRGLFE EAKGGSVFLD
EIAEMSKAAQ VKLLRLLTEG SFRRIGGDEE VRADVRIICS SQKNLAELCQ MGEFREDLYY
RIHVLSFHMP SLRERKVDII PLTEMFLEHY SQQLSSPMRR ISPNCRDHLL TYAWPGNVRQ
LKNAVFRAVS MWDGSAELTV EQLKLPSYAE GFGYFDNQFE GTLDEAMRQF ESSLLRRLYP
AYPSTRQLAK KLGVSHTAIA NKLREYKISK KR
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