| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2215 |
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| Symbol | |
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| ID | 4604465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2677804 |
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| End bp | 2678685 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781612 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_928090 |
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| Protein GI | 119775350 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTA AGCAGCTCAA CCACCTCATC GCAATATGCG AAACTGGCAG CTTTACCCGT
GCAGCAAAGC GACTGTCACT TGCCCAGCCA GCCCTGAGCC AGAGCATCAA AAAACTCGAG
CAGGAGCTGG GCGTCACCCT CATTGGCCGC AGCCAGGGCA TGAATGACAA GGGCATCAAG
CTCACCGCCG AGGGCCAGGT ACTGCTGGAA CATGCCAGAC GCATAGTGAA CCAACTCGGT
CAGGCCAAGG CACAGATTCA GGCCATGGCC GACCTGCGTC AGGGTGAAGT CAGGGTGGCG
GTTCCCGGCA TGTTGGGCTC CTTTTATCTG CCGTCACGGT TGATGGCCTT TCGTCACCGG
TACGGTGGCC TCAAACTGAG TCTGTTTGAG GGTGGCACCC GGGATGCGCT GCGGATGCTG
GAGCAGGAAG AGGTGGATAT TGCCATCATC ACGGCCAAAG ATCTGACCCC GGCGCTGAAC
TCTTGCCTGC TGCTGACCGA AGAAATGGTC GTGGCCATGG GCCATGAACA CCCGCTTTGC
GATAAAACCA GCGTCACCCT GGAAGAGTTT TTCGACCATG AGTTGGTCAT ATTCAAACCC
GGTTACTTTC ATCGGGAATG GCTGCTCTCC CAGGCAAGGG AGCTTGGGAT ATCCCCCACT
ATCGCCTTTG AAACCAACCT GATTAATCTT ATCAAACAGG TGGTTTCTCA GGGCTTTGCC
ATTACCAGTG TGCTGGACAT GGTGATATCT GCCAAAGATG AGATAGAGAA ACGGCCTTTT
AACCCGAGGG TATTTCTGGA CCTGCATATC GCCTGGAAAA AGAAACGTCC ACTGGGTCAG
GCCGACAAAG CCTTTGTCGA GTTTTTGCTG GCCAACAAAT AA
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| Protein sequence | MDIKQLNHLI AICETGSFTR AAKRLSLAQP ALSQSIKKLE QELGVTLIGR SQGMNDKGIK
LTAEGQVLLE HARRIVNQLG QAKAQIQAMA DLRQGEVRVA VPGMLGSFYL PSRLMAFRHR
YGGLKLSLFE GGTRDALRML EQEEVDIAII TAKDLTPALN SCLLLTEEMV VAMGHEHPLC
DKTSVTLEEF FDHELVIFKP GYFHREWLLS QARELGISPT IAFETNLINL IKQVVSQGFA
ITSVLDMVIS AKDEIEKRPF NPRVFLDLHI AWKKKRPLGQ ADKAFVEFLL ANK
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