| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2207 |
|---|
| Symbol | gltX |
|---|
| ID | 4605999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 2667907 |
|---|
| End bp | 2669316 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639781604 |
|---|
| Product | glutamyl-tRNA synthetase |
|---|
| Protein accession | YP_928082 |
|---|
| Protein GI | 119775342 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000288711 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTAA AAACCCGTTT TGCTCCCAGC CCCACTGGAT TCCTGCACGT TGGTGGTGCC
CGTACAGCGC TGTATTCATG GCTTCACGCC CGCGCCAATC AGGGGGAGTT TGTGTTGCGT
ATCGAAGATA CCGACCTTGA GCGCTCAACC CAAGAAGCAG TAGACGCTAT TTTGGAAGGA
ATGGAATGGC TGAACCTGAA CTGGGATGAG GGTCCTTACT ATCAGACCAA GCGATTTGAC
CGGTACAACG AAATTATCGA TCAAATGCTC AAGGCCGGTA CGGCATACAA ATGTTATTGC
TCCAAAGAGC GTCTGGAAGC CGTGCGTGAA GAGCAGGCCG CCAAGGGTGA GCGTCAGAAG
TATGATGGTT GCTGCCGCGG CGCCGCCCCT CGCGCTGAAG GTGAACCTCA TGTAGTGCGC
TTCCTGAATC CTCAGGGAGG CAGTGTGGTG TTTGATGACC ACGTGCGTGG CCGTATCGAA
ATTGCCAACG AAGAGCTGGA CGACCTTATC ATTCGCCGTA CCGATGGCAG CCCAACCTAC
AACTTCTGCG TGGTAGTGGA CGATTGGGAC ATGGGCATAA CCCACGTGGT GCGCGGTGAA
GACCATATCA ACAACACCCC ACGTCAGATC AATATTCTCA AAGCACTCGG TGCACCTATT
CCTGAATACG CCCACGTTTC CATGATCCTG GGTGATGATG GTGCCAAGCT GTCCAAGCGC
CACGGCGCTG TGAGTGTGAT GCAGTACCGT GACGACGGTT ATCTGCCAGA AGCCTTGTTG
AACTATCTGG TGCGTCTGGG CTGGTCCCAT GGCGATCAGG AAATCTTCTC CATGGATGAA
TTGGTGGAAT TTTTCCGTCT CGATGACATC AACAAGGCCG CCTCTGCCTT TAACAGCGAA
AAACTGCTGT GGCTGAACCA GCACTATATT AAAGCTTTGG ATCCTGAGTA TGTGGCCAAG
CACCTTGAGT GGCACATGAA GGATCAGGGT ATCGATACCA GCAATGGTCC GGCCCTTGCC
GACGTGGTGA CTGCGTTGTC TGAGCGCGCC AAAACATTGA AAGAACTGGC TGCATCAAGC
CGCTACTTCT ATGAAGACTT TGAAGAATTC GATGCCGACC AGGCCAAAAA GCATCTGCGT
GGTGTGGCAC TCGAGCCTTT GAAACTGGTT CAGCAGAAAC TGGCTGCCCT GACTGAGTGG
ACTCGCGAAG CAATTCATCA AGCCATTGAA GAGACAGCAA CTGAACTGGA AGTCGGTATG
GGTAAAGTGG GCATGCCACT GCGCGTTGCC GTGACCGGGG CAGGGCAGTC ACCTGGATTG
GATATCACCT TGGAACTCAT AGGAAAAGCC CGCTCTGAGC AAAGAATCTC CAAAGCGGTT
GATTTTGTAG CAGATAGGAT AAATTCCTAA
|
|---|
| Protein sequence | MTVKTRFAPS PTGFLHVGGA RTALYSWLHA RANQGEFVLR IEDTDLERST QEAVDAILEG
MEWLNLNWDE GPYYQTKRFD RYNEIIDQML KAGTAYKCYC SKERLEAVRE EQAAKGERQK
YDGCCRGAAP RAEGEPHVVR FLNPQGGSVV FDDHVRGRIE IANEELDDLI IRRTDGSPTY
NFCVVVDDWD MGITHVVRGE DHINNTPRQI NILKALGAPI PEYAHVSMIL GDDGAKLSKR
HGAVSVMQYR DDGYLPEALL NYLVRLGWSH GDQEIFSMDE LVEFFRLDDI NKAASAFNSE
KLLWLNQHYI KALDPEYVAK HLEWHMKDQG IDTSNGPALA DVVTALSERA KTLKELAASS
RYFYEDFEEF DADQAKKHLR GVALEPLKLV QQKLAALTEW TREAIHQAIE ETATELEVGM
GKVGMPLRVA VTGAGQSPGL DITLELIGKA RSEQRISKAV DFVADRINS
|
|---|
| |