Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2194 |
Symbol | queA |
ID | 4604444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2652619 |
End bp | 2653656 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639781579 |
Product | S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
Protein accession | YP_928069 |
Protein GI | 119775329 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.734639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0553646 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGTAG CTGACTTTAC CTTTGATCTT CCCGATGAAC TGATTGCCCG CTATCCCATG GCAGAGCGCA CCGCGTCGCG TCTGTTGCAT CTGGACGGCA GCACTGGTGC CTTGGCCGAT CGTCAGTTCA CCGATATTCT GGCGCTGATT GAGCCGGGCG ATCTGATGAT TTTCAATAAC ACCCGGGTGA TACCGGCTCG TCTCTTTGGC CAAAAGGCAA GCGGCGGCAA GTTGGAGATC CTGGTGGAGC GTATGCTTGA TGACAAGCGC ATTTTGGCCC ATGTTCGCTC GTCCAAATCC CCCAAACCCG GCGCCGAGAT TATCCTGGAC GGCGGCTTTA AGATGACGAT GGATGCCCGT CATGATGCAC TGTTTGAGCT GTCGCTCAAG GATGATAAGA CCATCCTCGA AGTGCTTGAA GCCGTAGGCC ATATGCCGCT GCCGCCTTAT ATCGATCGCC CCGATGAAGA TACCGACAAA GAGCGTTATC AAACCGTCTA TAACGAGCGC CCCGGCGCCG TTGCGGCTCC TACTGCCGGT CTTCACTTCG ATGAAAGCAT ACTCGCCGCC CTCAAAGCCA AAGGTGTGGA CATGGCATTT GTGACCCTGC ACGTGGGAGC GGGTACCTTT CAGCCGGTGC GGGTAGACAA CGTGCTCGAG CACAAAATGC ATTCAGAATG GGCCGAAGTA CCTGCCGATG TGGTTGAAAA AATCCGCGCC ACCAAGGCCG CAGGTAAGCG GGTGATTGCC GTGGGGACCA CCTCAGTGCG CTCCCTCGAG AGTGCCGCCA AGGCAAGTGA GGGTGAACTC GAGCCATTTT GCGGTGATAC CGATATCTTT ATCTTCCCCG GTTTCGAGTT CAAAGTAGTC GATGCCATGG TGACCAACTT CCACCTGCCG GAGTCGACAC TCATCATGCT GGTGAGCGCC TTTGCCGGCT TCGATGAGGT AATTGGCGCC TATCGCCATG CAGTTGAACA AAAATACCGC TTTTTCAGTT ATGGCGATGC CATGTTTGTG ACTAAAAAAG CCCCCTAA
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Protein sequence | MRVADFTFDL PDELIARYPM AERTASRLLH LDGSTGALAD RQFTDILALI EPGDLMIFNN TRVIPARLFG QKASGGKLEI LVERMLDDKR ILAHVRSSKS PKPGAEIILD GGFKMTMDAR HDALFELSLK DDKTILEVLE AVGHMPLPPY IDRPDEDTDK ERYQTVYNER PGAVAAPTAG LHFDESILAA LKAKGVDMAF VTLHVGAGTF QPVRVDNVLE HKMHSEWAEV PADVVEKIRA TKAAGKRVIA VGTTSVRSLE SAAKASEGEL EPFCGDTDIF IFPGFEFKVV DAMVTNFHLP ESTLIMLVSA FAGFDEVIGA YRHAVEQKYR FFSYGDAMFV TKKAP
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