Gene Sama_2189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2189 
Symbol 
ID4604439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2647632 
End bp2647949 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content55% 
IMG OID639781574 
Producthypothetical protein 
Protein accessionYP_928064 
Protein GI119775324 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.612921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00273146 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAACAAC GTAAATGTTT ATTGGCCGGT GGCAATTTGC TGCAGGCCCA CACCTGGAAA 
GGGCTGTTAC AGGTTGCCGG TATACAGGTG GAACTCAGAG GCGAGGCGCT GCTCGGTGGT
GTAGGTGAAC TGCCGGTGGA TCTGCAAAAC GTGGAGTTGT GGGTCAATGA ATCTGAGCTC
GCCAAGGCCC AAAGCCAACT CGACAGTCTG GGCGGCGACC GTCCCCAATG GCAATGTTTG
AACTGCCATG AGATGAATGA GGCCAGCTTT GAGCTGTGTT GGCACTGCAG TTCTGAGCGT
AGCGAAGCCC ATAACTGA
 
Protein sequence
MEQRKCLLAG GNLLQAHTWK GLLQVAGIQV ELRGEALLGG VGELPVDLQN VELWVNESEL 
AKAQSQLDSL GGDRPQWQCL NCHEMNEASF ELCWHCSSER SEAHN