| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2177 |
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| Symbol | |
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| ID | 4604427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2633235 |
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| End bp | 2634683 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781562 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_928052 |
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| Protein GI | 119775312 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000107736 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0804917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATAG ATACACCTAT TTTAGTCACC TTTGTGGGCT ATTTAGCCCT GATGATGGGG
ATAGGATTCT GGGCCTACAA GGCCACAGAC TCCGTTGATG ATTACATTCT TGGTGGCCGC
AAAATGGGCC CGGGCGTAAC CGCTCTGAGT GTGGGCGCCT CTGATATGTC CGGCTGGTTG
TTGCTGGGTT TGCCCGGTGC TGTTTACCTT GGTGGTCTCG GTGAAGCCTG GATTGGTATT
GGCCTGGTGA TTGGCGCCTG GTTGAACTGG CTCTTTGTGG CAAAGCGCCT GCGTATATAC
ACCCAGCTTG CCGATAACGC CCTGACTCTT CCAGACTTTT TCGAAAAACG CTTCCACGAT
AAAGCGGGTC TGCTGCGCTT TGTCTCTGCC CTGACCATAC TGGTATTTTT TACCTTTTAT
GCCTCCTCGG GCATGGTGGG CGGCGCCATT CTGTTCGAAA AGGTATTTGG TCTGGATTAC
ACCGCCGCCC TGGTGATAGG TTCTGCTATC ATCGTCGGCT ACACCTTTGT GGGTGGATTT
TTCGCCGTAA GCTGGACCGA TTTTTTCCAG GGCTGTTTGA TGCTGATTGC CCTGCTGATT
GTTCCCATGG CCATTTTTAC CAACAGCGAG AGCCACGCCA GCATTGACAC CCTCTCACCG
GAAATGCTGT CCCTGATTGG CGAAGGCACC ACACTCATGG GCGTCGCCTC CCTGATGGCT
TGGGGCCTGG GGTATTTTGG CCAGCCCCAC ATTTTGTCAC GCTTTATGGC CATTGAGCGC
CCGGAGCATT TGCCGGTGTC ACGCCGCATT GCCATGAGCT GGATGATAGT GTCCCTAATG
GGGGCATTGG CCACTGGCCT TGCCGGCAGC CTCTATTTTG CCAAAGAACC GCTCGCCAAT
GCCGAGACCG TCTTTATTCA TCTGGCTCAG GTGGCGTTCA ATCCCTGGAT TGCGGGCCTG
CTCATTGCCG CCATTCTGTC GGCTATTATG AGCACCATCG ACTCCCAACT GCTGGTGTGT
TCCAGCGTGG TGACCGAAGA CTTCTATCGC AAGCTGCGCC CCAAGGCCGA TGACAATGAA
CTAATGCGTG TCGGTCGTAT CGGAGTGCTG GCCATCGCTA TCATCGCCGG CGTCGTGGCA
TTGGATCCCC AAAGCAGTGT GCTCGGGCTG GTGAGCTATG CCTGGGCCGG ATTTGGTGCA
GCCTTCGGCC CTGTGGTGCT CTTGTCGCTG TTTTGGCGTG GCTACAGCAA AACAGGAGCT
CTGGCGACTA TCATCACAGG TGCAGTAACG GTAGTGGTAT GGAAACAGCT CAGTGGCGGC
TTCTTTGATC TGTACGAAAT ACTGCCCGGC TTTATTCTGG CCACACTGGC CGGGGTGCTC
ATCAGCTTGG TCGCACCAGC AAATGACAGT GTCCGGGCCG AGTTTGACAG CTTCCAAAGC
AAACTCTGA
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| Protein sequence | MSIDTPILVT FVGYLALMMG IGFWAYKATD SVDDYILGGR KMGPGVTALS VGASDMSGWL
LLGLPGAVYL GGLGEAWIGI GLVIGAWLNW LFVAKRLRIY TQLADNALTL PDFFEKRFHD
KAGLLRFVSA LTILVFFTFY ASSGMVGGAI LFEKVFGLDY TAALVIGSAI IVGYTFVGGF
FAVSWTDFFQ GCLMLIALLI VPMAIFTNSE SHASIDTLSP EMLSLIGEGT TLMGVASLMA
WGLGYFGQPH ILSRFMAIER PEHLPVSRRI AMSWMIVSLM GALATGLAGS LYFAKEPLAN
AETVFIHLAQ VAFNPWIAGL LIAAILSAIM STIDSQLLVC SSVVTEDFYR KLRPKADDNE
LMRVGRIGVL AIAIIAGVVA LDPQSSVLGL VSYAWAGFGA AFGPVVLLSL FWRGYSKTGA
LATIITGAVT VVVWKQLSGG FFDLYEILPG FILATLAGVL ISLVAPANDS VRAEFDSFQS
KL
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