| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2152 |
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| Symbol | |
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| ID | 4604402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2600610 |
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| End bp | 2601626 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781537 |
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| Product | aspartate-semialdehyde dehydrogenase |
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| Protein accession | YP_928027 |
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| Protein GI | 119775287 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
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| TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000198984 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGG AATTTAATGT CGTAGTTTTG GGTGCATCGG GCGCCGTGGG TCAGACCATG
ATCGAGATCC TCGAAGAGCG CAATTTCCCG GTTGCCAAGC TGTTCCCTCT GGCCAGTGCC
CGCAGCGCCG GTGATACCGT AAGCTTCCAC GGTAAACAGG TGGAAATTCT TGACGTTGAA
ACCTTTGATT GGTCACAGGC TCAAATCGGT TTCTTCTCCG CGGGCGGTGA TGTGTCTGCT
AAGTGGGCCC CCATCGCGGC AGAGCACGGC TGCGTAGTTA TCGACAACAC GTCACACTTC
CGCTATGACC TGGATATCCC GCTGGTGGTG CCAGAAGTGA ACCCTGAGGC CATTGCCGAT
TTCCGTAACC GTAATATCAT TGCCAACCCC AACTGCTCCA CCATTCAGAT GTTGGTGGCA
CTGAAGCCCA TTTACGATGC CTACGGAATC GATCGCATCA ACGTGTGCAC CTATCAGTCG
GTGTCCGGTA CCGGTAAAAA GGCTATCGAA GAGCTGGCGG GCCAGTGTGC CAAGCTGCTC
CAGGGACTGC CAATCGAGCC AAGCGTTTAT CCAAAGCAGA TAGCTTTTAA CGTGCTGCCA
CATATCGATA AATTCCAGGA TAATGGCTAC ACCAAAGAAG AGATGAAAAT GGTGTGGGAG
ACCCGCAAAA TTTTCGGTGA CGACTCTATT CTGGTGAACC CTACGGCGGT GCGTGTACCT
GTGTTTTACG GTCACTCCGA AGCCGTGCAT ATCGAAACCC GTGACCCGGT GGATGCCGAC
ACTGTGAAAG CATTGCTGCG CGATGCCCCC GGTGTCGTGC TTTTTGAAGA CGATGATGAT
TACCCAACCG CCGTTACCGA CGGTGCTGGC CAGGATCCTG TGTTCGTTGG CCGTGTGCGT
AACGACATCT CTCATCCCAA CGGGATCAAC CTTTGGGTGG TGTCAGATAA CATTCGCAAA
GGTGCTGCCC TAAACAGCGT ACAAATTGGT GAAATTCTCA TCCGCGATTA TCTGTAA
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| Protein sequence | MSQEFNVVVL GASGAVGQTM IEILEERNFP VAKLFPLASA RSAGDTVSFH GKQVEILDVE
TFDWSQAQIG FFSAGGDVSA KWAPIAAEHG CVVIDNTSHF RYDLDIPLVV PEVNPEAIAD
FRNRNIIANP NCSTIQMLVA LKPIYDAYGI DRINVCTYQS VSGTGKKAIE ELAGQCAKLL
QGLPIEPSVY PKQIAFNVLP HIDKFQDNGY TKEEMKMVWE TRKIFGDDSI LVNPTAVRVP
VFYGHSEAVH IETRDPVDAD TVKALLRDAP GVVLFEDDDD YPTAVTDGAG QDPVFVGRVR
NDISHPNGIN LWVVSDNIRK GAALNSVQIG EILIRDYL
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