| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2119 |
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| Symbol | |
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| ID | 4604369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2563080 |
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| End bp | 2564093 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781504 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_927994 |
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| Protein GI | 119775254 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000182338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAATTTT TATACGAATA TGGGCTGTTT CTTGCCAAGG CTGTGACAGT GGTCGCCGCC
ATCGGTGCCA TTCTGGTGAT GGTGTTTGCC GGTGCGGCCC GAGGTAAGGG TGATAAAGGC
GAACTGGTGC TGACCAATGT CACCGAAGAA CTCGATCATT TAAAGATGCA CCTTAAACAC
GAACTGCTTG ATAAGAAAGC ATTCAAGGCG TACGAAAAGG CCCAAAAAGC CGAGGCCAAA
GAGGCTGAGA AGCAGGATAA GCCTAAGCCC AGAACGTTTG TGCTGGATTT TAAAGGCAGT
ATCGATGCCC ATGAAGTAGC CTCTTTACGG GAAGAAATCA GCGCGATACT GACCATTGCC
GAAAAAGGCG ATGAGGTGCT GCTTAACGTC GAGAGCGGTG GTGGCATGGT ACATGGTTAC
GGTCTTGCGG CGAGCCAGCT CGACAGACTG CGTCAGGCCG ACATTCCTCT GACCGCCTGT
ATCGACAAGG TGGCGGCCAG TGGCGGCTAC ATGATGGCCT GCGTGGCCAA TCGCATCTAC
GCCGCGCCCT TTGCCATTGT GGGGTCTATC GGTGTGGTGG CTCAACTGCC GAACTTCAAC
CGCTTGCTGA AAAAGCATGA TATTGATTAC GAGCAGCACA CCGCCGGGGA CTTTAAGCGC
ACTCTGACGT TGTTTGGTGA AAATACCGAA GAGGGCAGAC AGAAATTCCG TGAAGAGCTG
GAGGAGACCC ATCAGCTGTT TAAGGCCTTC GTATCCAAGT ATCGCCCTGA GCTTGATCTG
GACAAGGTTG CCACCGGTGA GCACTGGTAC GGACAGCAGG CCCTGGATTT GGGGCTGGTG
GACAGCATCA GCACCAGCGA CGACCTGATG CTGACAGCGG CCAAAGACAG AACCCTGATT
AAACTGCGTT ATCAGCCGCG GAAGAAGCTC GCCGACAAGC TGGCCCACAG CGCCGCACTG
ACAGTCAGTA CTTTTTTTGG AAAGCTGGCG GAAAAGAATA AACCGCTGCC ATAA
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| Protein sequence | MEFLYEYGLF LAKAVTVVAA IGAILVMVFA GAARGKGDKG ELVLTNVTEE LDHLKMHLKH
ELLDKKAFKA YEKAQKAEAK EAEKQDKPKP RTFVLDFKGS IDAHEVASLR EEISAILTIA
EKGDEVLLNV ESGGGMVHGY GLAASQLDRL RQADIPLTAC IDKVAASGGY MMACVANRIY
AAPFAIVGSI GVVAQLPNFN RLLKKHDIDY EQHTAGDFKR TLTLFGENTE EGRQKFREEL
EETHQLFKAF VSKYRPELDL DKVATGEHWY GQQALDLGLV DSISTSDDLM LTAAKDRTLI
KLRYQPRKKL ADKLAHSAAL TVSTFFGKLA EKNKPLP
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