| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2113 |
|---|
| Symbol | |
|---|
| ID | 4604363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 2555711 |
|---|
| End bp | 2556208 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639781498 |
|---|
| Product | ErfK/YbiS/YcfS/YnhG |
|---|
| Protein accession | YP_927988 |
|---|
| Protein GI | 119775248 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3034] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCGTC AGCTGTTGGT GTTATTGCTG CTGGTCAGTG CCAGTGTGCA GGCAAATGCA
ATTAAACCGG GTCAGAAAGT AGACCTGGTG GTGGTTAACA AAGCAGAAGC ACAAATGCAG
GTGTTTTACC GCGGTGAGCT CATTAAGAGC TATCGCATTG CAATGGGCGA CAACCCCAAG
GGACATAAAC TCAAAGAAGG CGATCAGCGC ACCCCACAGG GCCGTTACCT GCTGGACTTT
AAAAAGGCCG ACAGCGCCTA TTACCGCTCT ATTCACATCT CTTATCCCAA CGACGAAGAC
ATTCTGCGCG CCAAAGCCCT CGGTATAAGC CCCGGTGGCG CCATTATGAT CCATGGTCAG
GACCCCAAAT CGCCCCTGAG TGCAGAAGAA GCGCAAAAGT ATAACTGGAC CAACGGCTGT
ATCGCCGTCA CCAACAGAGA CATGGATGAG CTGTGGCAAT TGATAGACCC AGGCACTCCT
ATCGAAATCT GGCCCTGA
|
|---|
| Protein sequence | MFRQLLVLLL LVSASVQANA IKPGQKVDLV VVNKAEAQMQ VFYRGELIKS YRIAMGDNPK
GHKLKEGDQR TPQGRYLLDF KKADSAYYRS IHISYPNDED ILRAKALGIS PGGAIMIHGQ
DPKSPLSAEE AQKYNWTNGC IAVTNRDMDE LWQLIDPGTP IEIWP
|
|---|
| |