| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2093 |
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| Symbol | |
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| ID | 4604343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2537303 |
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| End bp | 2538079 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781478 |
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| Product | ribonuclease T |
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| Protein accession | YP_927968 |
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| Protein GI | 119775228 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000154544 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCCA AGGCGCCTTT TAGCATAATA GCGCCCTTTG CAACGACCAG AGAATTCAGG
ATGTCTGACG CCTTCAACCC CAACAAGCTC AAGTACCGGT TCCGTGGCTA TTATCCTGTG
GTAATCGATG TAGAAACCGC CGGCTTCAAT GCCCAGACCG ATGCCTTGCT GGAAATAGCC
GTCACCCTGC TGACTATGGA CGATAACGGC ATGCTGGCGC TGGATAAAAC ACTGCATTTT
CATATTGAGC CCTTTGAAGG TGCCAATCTC GAACCTGCTG CGCTGGCCTT TAACGGCATA
GACCCAAGTA ATCCCCTGCG TGGGGCCGTC AGTGAAAAAG AGGCGATGCT GGAAATATTC
AAGGCGGTGC GCAAAGGCAT GAAAGCCGCT GATTGCCACA GGGCCGTGAT AGTGGCCCAC
AATGCCGCCT TCGACCATGG CTTTGTGACC AAGGCGATTG ACCGCAGTGG CGTAAAACGC
TCGCCATTCC ATCCCTTTGC CACTTTTGAT ACTGCCTGTT TGTCTGGTCT GGCCCTGGGG
CATACAGTGC TGGCGCAGGC CTGTAAAATC GCCGGTATTC CCTTCGACAA TAAAGAAGCC
CACAGCGCCC TCTACGATAC CGAGCGTACC GCCGAGCTCT TCTGTTATAT CGTCAACCGC
TGGAAGTCCC TCGGTGGCTG GCCATTACTG GGCGCCGAGG CTCTGGATGA CGCCGAGAAT
ACGGCTGCGG ATAAGGAGAT CGATGATGAG GATACCCTGG GTAGCACTGG CGAATAA
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| Protein sequence | MTAKAPFSII APFATTREFR MSDAFNPNKL KYRFRGYYPV VIDVETAGFN AQTDALLEIA
VTLLTMDDNG MLALDKTLHF HIEPFEGANL EPAALAFNGI DPSNPLRGAV SEKEAMLEIF
KAVRKGMKAA DCHRAVIVAH NAAFDHGFVT KAIDRSGVKR SPFHPFATFD TACLSGLALG
HTVLAQACKI AGIPFDNKEA HSALYDTERT AELFCYIVNR WKSLGGWPLL GAEALDDAEN
TAADKEIDDE DTLGSTGE
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