| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2077 |
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| Symbol | |
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| ID | 4604327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2515300 |
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| End bp | 2516589 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781454 |
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| Product | oxidoreductase |
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| Protein accession | YP_927952 |
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| Protein GI | 119775212 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCTC GTTGCGGCTC TTATTACAAT GCCACCATCA AACACGAAAC TGACTATCCG
CGCTTAACTG AAGCAATTCA AGCAGATGTG GCGGTGATCG GCGGTGGATT TACCGGCGTA
AACACAGCGC TTGAACTGGC CGAACAGGGT TATAAAGTGG TGCTGCTGGA AGCCAATAAG
ATTGCCTGGG GTGCCACAGG CCGTAACGGC GGCCAGGTCA CAGGGTCGCT GTCAGGCGAT
CAGGCCATGA CCAAACAGCT CAGAAACCGT ATCGGCGCAG AAGCCGAGGA TTATGTTTGG
GCGCTGCGCT GGCGTGGTCA CGATATCATC AAGAACCGGG TGGCTAAGTA CAATATCGAC
TGTGATTTGC GCCATGGCCA TTTGCACACA GCCTATAAAC CAGCCCACAT GAATGAGCTT
AAATCCATGT TGGACGAAGC CCAGCGAAAG GGTATGGGCG ATCTGGTGTC ATTGGTCGAA
AAAGACGAGA TGCCTCAGTA TCTCGAATCG CCTCTCTACC ATGGTGGCTT GCTCAATAAA
AAGAACATGC ACCTGCATTC GGTTAATCTG TGTATCGGTG AGGCGAGGGC GGCAGAAAGC
CTGGGTGTGC GGATTTTCGA AGATACGCAA GTATTGGATA TCGTTGAGGG CCCTCGTCCG
GTGGTGAAAA CGGCCTTTGG CAGCGTCACT GCAAACAAGG TGCTCATTGC CGGCAACGCC
TATCACAAGC TGGGGCGCCC GAAACTCAGA GGCATGCTAT TTCCGGCATC CCTGGGCAAC
TGTGCAACTG TACGCTTATC AGACGAAGTG GCCAGTGCAA TCAATCCACA CAATCTTGCC
GTGTATGATT GCCGCTTTGT ACTCGATTAT TATCGGCTTA CCGCGGATAA CCGCCTTATG
TTCGGTGGCG GCACCAACTA CAGTGGCCGT GATCCCAAGA ATGTGGCCGA AGAGCTGCGC
CCTGCGATTG AACGCACCTT CCCGCGACTT AAAGGTGTGG AGATAGAATT CGCCTGGGCC
GGTATGGCGG GGATTGTGAT TAACCGCATA CCGCAGCTTG GCAAAGTCTC CGAGCACGTC
TACTACTGCC AGGGTTATTC GGGCCATGGG GTGGCGACCA GCCACATCAT GTCAGAAATC
ATGGCCAAAG CCATTGATGG TGATCTGCGT GAGTTTGGCC TCTTTGCCGG TATGAAGCAC
TGGCGCATTC CACTGAATGA ATGGTTTGGC AATCAGGCGT TGGCCATTGG TATGCTTTAC
TATCAGCTGC GTGAGAGCCT CCGGGGCTGA
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| Protein sequence | MQARCGSYYN ATIKHETDYP RLTEAIQADV AVIGGGFTGV NTALELAEQG YKVVLLEANK
IAWGATGRNG GQVTGSLSGD QAMTKQLRNR IGAEAEDYVW ALRWRGHDII KNRVAKYNID
CDLRHGHLHT AYKPAHMNEL KSMLDEAQRK GMGDLVSLVE KDEMPQYLES PLYHGGLLNK
KNMHLHSVNL CIGEARAAES LGVRIFEDTQ VLDIVEGPRP VVKTAFGSVT ANKVLIAGNA
YHKLGRPKLR GMLFPASLGN CATVRLSDEV ASAINPHNLA VYDCRFVLDY YRLTADNRLM
FGGGTNYSGR DPKNVAEELR PAIERTFPRL KGVEIEFAWA GMAGIVINRI PQLGKVSEHV
YYCQGYSGHG VATSHIMSEI MAKAIDGDLR EFGLFAGMKH WRIPLNEWFG NQALAIGMLY
YQLRESLRG
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