Gene Sama_2075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2075 
Symbol 
ID4604325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2513940 
End bp2514365 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content51% 
IMG OID639781452 
Productthioesterase superfamily protein 
Protein accessionYP_927950 
Protein GI119775210 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTGA CTGACACCCA GCCACAATTT CCTGAAGCCA TTGCCCGCCG TATTGACGCA 
TCGGAAGCGC GCGTTATCAA AGCGGTTTTT CCGTCCAACA CCAACCACCA CAATACCCTG
TTTGGCGGTG AGGCCCTCGC TTGGATGGAT GAAACTGCCT TTATCGCCGC TACCCGATTT
TGCCGAAAAA CCCTGGTCAC CGTGAGCTCG GACCGCATCG ACTTCAATAA AGCCATTCCC
GCCGGCAGCC TCGCAGAATT GATTGCCCGG GTGATCCATG TAGGTAACAC CAGCCTCAAG
GTAGAAGTGA ATATTTTTGT TGAAGACATG TATCAGGATA AAAGAGAACA CGCCATTCGT
GGCGTCTTTA CCTTTGTGGC GGTAGATGAA AATCGCAAAC CCACTCAGGT ATGGTCACAG
GACTAA
 
Protein sequence
MPLTDTQPQF PEAIARRIDA SEARVIKAVF PSNTNHHNTL FGGEALAWMD ETAFIAATRF 
CRKTLVTVSS DRIDFNKAIP AGSLAELIAR VIHVGNTSLK VEVNIFVEDM YQDKREHAIR
GVFTFVAVDE NRKPTQVWSQ D