Gene Sama_2048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2048 
Symbol 
ID4604298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2483658 
End bp2484770 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content54% 
IMG OID639781425 
ProductATP-binding Mrp/Nbp35 family protein 
Protein accessionYP_927923 
Protein GI119775183 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.912388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.694942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTAACTG AGCACAATTA TCGACTGGAA GAGCCACTGA AGTCTGCCGT GTTATCTGTG 
TTGGAGGCCC ATGTGGAGCC GCTGCTTGGT AAAGGATTGG TCAGTGCAGG CATGGTGCAA
AAACTGGCCT TGAACGGCCG TCGGCTTGAA CTTGGATTGG TTTATCCTTA CCCCTGCCAA
ACCACTTACA AAGATACCGT AATGACATTG ACCAAGGCGC TGGCCAAGCT TGATGTTATC
GACGAAGTTG AGTGTGAAAT CGATCTGCAA GTCCCTGCCA ATGCGGGAAA TACCAATGCA
GCGCCTATTC CCAACGTCAA AAACGTCATT GCCGTAGCCT CGGGCAAGGG CGGGGTGGGC
AAGTCCACCA CCGCCGTAAA TCTTGCATTG GCACTGGCAG CCGAAGGCGC TAGCGTAGGC
ATTTTGGATG CCGACATTTA CGGTCCTTCC GTGCCCTTGA TGCTGGGTGT GCCCGATTTT
AAACCTGTGT CCCCCGATGG CAAAATGATG ACCGCCGCCA ACGCCCACGG GATTGCCGCC
CAGAGTATCG GTTTTATTCT CGACGACGAG CAGGCTGCCG TTTGGCGCGG TCCAATGGCC
GCTGGTGCCC TGGTGCAGTT GGTGAATGAA ACCAGTTGGC CTGAGCTCGA TTATCTGGTG
GTGGATATGC CGCCGGGCAC GGGAGATATT CAGCTGACGT TGTCTCAAAA GGTGCCGGTA
AGCGGCGCCG TTGTGGTTAC CACGCCTCAG GATATCGCCA CGCTCGATGC CAAAAAGGGC
ATCAGTCTCT TCAATAAGGT CAACATTCCA GTCATTGGGA TAGTTGAAAA CATGAGTTTC
CACCTGTGTC CGAGCTGCGG ACACAAAGAA CACCCCTTTG GTACCCTGGG CGGCAGTAAA
ATTGCTGAGC GCTATCATGT ACCGCTGCTT GGCGCGTTGC CCTTAAACAT CGCCATCAGG
GAAGGAATGG ATGCAGGTAA TCCCTCTGTG GTTGCCGAGC CTTCGGGTGA AATTGCCGCT
ATTTACCGGG AAATAGCGCG GAAAGTGGGT GCCAGTCTTG CAAAGACGGG ACCCCAGACC
GGTGTATCCA TTAGCATTTC GGACGATGAG TAA
 
Protein sequence
MLTEHNYRLE EPLKSAVLSV LEAHVEPLLG KGLVSAGMVQ KLALNGRRLE LGLVYPYPCQ 
TTYKDTVMTL TKALAKLDVI DEVECEIDLQ VPANAGNTNA APIPNVKNVI AVASGKGGVG
KSTTAVNLAL ALAAEGASVG ILDADIYGPS VPLMLGVPDF KPVSPDGKMM TAANAHGIAA
QSIGFILDDE QAAVWRGPMA AGALVQLVNE TSWPELDYLV VDMPPGTGDI QLTLSQKVPV
SGAVVVTTPQ DIATLDAKKG ISLFNKVNIP VIGIVENMSF HLCPSCGHKE HPFGTLGGSK
IAERYHVPLL GALPLNIAIR EGMDAGNPSV VAEPSGEIAA IYREIARKVG ASLAKTGPQT
GVSISISDDE