| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2046 |
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| Symbol | dcd |
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| ID | 4604296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2482392 |
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| End bp | 2482976 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781423 |
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| Product | deoxycytidine triphosphate deaminase |
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| Protein accession | YP_927921 |
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| Protein GI | 119775181 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.416857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.66664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGATTGA CAGACTTTGA AATTGAGCAG GCCCTCGACG CCGGAACCAT CCTTATTGAG
CCTCGGCCAA GCAATGATGC TATCAGCGGC GTCAGTGTGG ATGTGCGCCT GGGGAACCAA
TTTCGGGTAT TTCAGGATCA CACGGCACCC TTTATCGATC TGAGCGGACC CAGTGCCGAG
GTGCAGGCGG CGCTGGACCG GGTCATGAGC GACAAGATTG ATATCAAAGA CGGCAATGCT
TTTTTCCTAC ACCCGGGGGA ACTGGCGCTT GCCGTGACCC TGGAAAGTGT GACTCTGCCG
GCGGATATCG TGGGTTGGCT CGATGGCCGT TCATCCCTGG CTCGCTTAGG TTTGATGGTC
CACGTAACTG CCCACCGTAT CGACCCGGGC TGGCAGGGTA AAATCGTGCT CGAATTCTAC
AACAGTGGTA AGTTGCCGCT GGCGCTGCGA CCTGGCATGA CCATAGGTGC GCTTAACTTT
GAACGTTTGA GCGGCCCCGT GTCCCGCCCC TATAACAAGC GTAAAAACGC CAAGTACAAG
GATCAGCAGG AAGCGGTGGC CAGCCGCATC AGCCAGGACT CCTGA
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| Protein sequence | MRLTDFEIEQ ALDAGTILIE PRPSNDAISG VSVDVRLGNQ FRVFQDHTAP FIDLSGPSAE
VQAALDRVMS DKIDIKDGNA FFLHPGELAL AVTLESVTLP ADIVGWLDGR SSLARLGLMV
HVTAHRIDPG WQGKIVLEFY NSGKLPLALR PGMTIGALNF ERLSGPVSRP YNKRKNAKYK
DQQEAVASRI SQDS
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