| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2029 |
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| Symbol | |
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| ID | 4604279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2467794 |
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| End bp | 2468999 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781406 |
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| Product | membrane-bound lytic transglycolase-related protein |
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| Protein accession | YP_927904 |
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| Protein GI | 119775164 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000748498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.890774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGTACC CATTCATCCT GGCCTCGTCA CTGAGCATTC TCACTGCATT CTCAGCCGGT
GCTGAGCCGC GCACCTTTGA GCAATGCATT GCCGATATCA AAGTGGATGC CCAGAGTGCT
GGCATCTCCC CCCAAAGCAT TGCTGTACTC GATAGTGTCA AACCATTACA GCGGGTGGTA
GAGCTTGACC GAAGCCAACC CGAATTTACC CAGACCTTTG CCGATTACTT CAATAAAAGA
GTCACGGAAC GCCGGATATC GGAAGGGCAA AAAATGCTCA AAACCCACGG TGCCCTGCTT
AACAAGTTGC AAAAGGAGTA TGGTGTACCA CCCCAATATC TGCTGGCTTT TTGGGGACTT
GAAACCAACT TTGGTGGCTA CAAAGGTAAG ATGCCGGTAC TGGATGCGTT GGCGACTCTG
GCCTGTGACG CCCGCCGAAG CCAGTATTTC ACCCAGGAAC TGCTGCAGGC ACTGCGGCTT
GGCGATAAGT TTGGATTGTC ATTTGAAGAC ATGGTCGGCT CCTGGGCCGG TGCCATGGGC
CACACGCAGT TTATGCCAAC AACCTATCTC ACCTATGCCG TGGACGGCGA TGGTGATGGC
AAGGTCGATT TGTGGAACAG TACCGAGGAT GCTTTAAGCT CTGCTGCCAA CTTTTTAATG
CAGCTTGGTT GGCAGCGAAA CGAGCGTTGG GGCAGGGAAG TTCTGCTGCC AAAACATTAT
GACTATGAAA GCCTTGGCAG GGACCACCGT AAACCGTTGG CCGAGTGGCA AACGTTAGGG
TTAACCACCG TATTTGGTCA TCCAATTCCC ACCGCGCCCA TGGACGCCGC CCTTTATTTA
CCAGCGGGGC ATACAGGCCC GGCATTTTTG GGGTACAGCA ACTTTGAGGT GATTCAGCGT
TGGAACCGCT CAGAGTTCTA TGCGCTTGCG GTGGGGCATC TGGCCGACCG CATTAACGGG
GCAAAGCCGC TTAAAGTTGC CCCACCTCTG CAGCCAAGAA GAACCCGGGA TGGGCTCAAA
GCCATGCAAC AAAAGCTGAT TGAACTTGGG TACGATATCG GCGCTGCAGA CGGCATTATC
GGCAGCAAAA CCTCTGCTGC AATCCGTGAC TTTCAACGGC GCAACAAACT GGTGCCTGAT
GGTTTTGCCG ACGATGCGAC CCTTAATGCT CTGGGATTGG ATGTCGCATC TATCAGCTCA
AAATGA
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| Protein sequence | MKYPFILASS LSILTAFSAG AEPRTFEQCI ADIKVDAQSA GISPQSIAVL DSVKPLQRVV
ELDRSQPEFT QTFADYFNKR VTERRISEGQ KMLKTHGALL NKLQKEYGVP PQYLLAFWGL
ETNFGGYKGK MPVLDALATL ACDARRSQYF TQELLQALRL GDKFGLSFED MVGSWAGAMG
HTQFMPTTYL TYAVDGDGDG KVDLWNSTED ALSSAANFLM QLGWQRNERW GREVLLPKHY
DYESLGRDHR KPLAEWQTLG LTTVFGHPIP TAPMDAALYL PAGHTGPAFL GYSNFEVIQR
WNRSEFYALA VGHLADRING AKPLKVAPPL QPRRTRDGLK AMQQKLIELG YDIGAADGII
GSKTSAAIRD FQRRNKLVPD GFADDATLNA LGLDVASISS K
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