| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2025 |
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| Symbol | |
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| ID | 4604275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2460445 |
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| End bp | 2462355 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639781402 |
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| Product | prolyl oligopeptidase family protein |
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| Protein accession | YP_927900 |
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| Protein GI | 119775160 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00251963 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGT TTCTGTTAAG CCTTACCGCA GTTACCTGCA TGGCATCACA GCCACTCTAT
GCGGAGCCAG TGACTGCGCA GTCACAAGCC GTGAGCACTA TTGAAGCCTT TTCTACTGCG
CCTCTTATTC GCAGTGTTGC TGTTTCAAGC GACGGAACCA AAGTAGCCAT CATCCGGGCC
ACGTCGAAGG AAGGTGACTA TGTGATTGAA ATCCGCGACA CGAGCAAACT CGATGCCCAA
CCAATCGTTT TGGGAGCAAA TCGTATGATG GTTTCGGGTG TCGTGTGGCT TAACAATGAC
AAGATTGGCG TAATGTTCCG TCAGATCTTG AAAGATGGTG CCAGAAGGTA TTGGGTAAAC
CGATTTGCAA TTACCGATGC AGATGGGAAA GGAGATTGGT TAATTCCGTT TCAAAACAAT
CCCCGCGCAG GTTTTTCTAT CCTGAATACC TTGCCTGATA ACAAGGATGA AATCCTGGTT
GAAACCGACC TGAACAACAA CTACAAGCCT GATGTTGTCC GTTTTAACGT AAATAATGGT
CGCACAGTCT CAGTTCTTCG AGGCAGTGAC AAAATTTCTG GTGGTTATAT CTCAGATGCA
GATGGTGATG TACGCGCTGC GACAGGCTGG AATTTGTCAG ACAATGCCAT CGACCTTTAT
GCCAGAGCGA AGGGCGATAG TGACTGGAAG CTCGTGAAAC AGATTTCACC CAAATCCAGA
GAAAGTTACA GCTTTATCGG CTTTTCAAAG GAAAATCCCG ATGAAATTTA TGTCAACGCC
AACCAAGGGC AGGACAAAAC CGGAATCTAC CTTTACAACA TTAAAACGGG CCAGTATTCC
GAACGTCTAT TCGGTTTGGA AAACGTCGAT GCGGATGGCG TGATCCAGAA AAAAGACGGT
AGCTTGGTTG GATTTGGTTA TTCAGCAAAA TGGCCTCAGC GCTATCTTAC CGATGCCAAT
GAACAAGCAA TTTATGATGG ATTGGATAAA CTGTTTGAAG GCAAGTTTGT TTCCATTATT
AGCCGTTCTA ATGATGACTC AGTCATGGTG GTCAGTGCGT CATCCGACAA GGATCCTGGG
ACTTATTACC TTGTTTTAAA CAAAAGTAAA ATTGAAACCA TCGGCAGTAA GTTGCCCTTT
GTCGACCAAG AAAAACTTGG TAGCGTCAAA TACATCTCTT ACAAAGCCCG TGATGGCCGT
AAAGTCTACG CATATGTCAC TCTTCCAAAA GGAAAAGGAC CGTTTCCTGC GGTAGTATTG
CCACATGGTG GCCCTTGGGT TCGAGACACA ATCGTATTTG ACGATTGGGC GCAATTACTG
GCTTCCAATG GTTATGTTGT TATCCAGCCC AACTACCGAG GTTCAACCGG TTATGGTATC
GAGCACTGGA CTGCGGGTGA CAACAATTGG GGCCTGAAAA TGCAGGACGA CCTTGATGAT
GCTGCCATGT ATCTGGTTGA AAAAGGACTG GCCACCAAGG ACAAGTTGGC CATGTTTGGT
TGGAGTTATG GTGGTTACGC CGCTTTCGCC GCGTCAATGC GCGATAATAA CATTTACCAG
TGTACTGTTG CCGGAGCGGG TGTCAGCGAT TTAAGTAAAA TCAATGCAAC CTTGAACGAA
AATCGGTTCT TAAGCCGTCT GCAACGTCCA ACAATCACGG GTGTTTCACC TCTTTCACAG
GTTGAGAAAG TCAATGTGCC AATACTCGTG GTACACGGTG ATATCGATGG ACGTGTGCCA
GTTGCCCACA GCCGTGAGTT TGTAGAAAAA CTCAAGGATT TGAAAAAGGA TCATAAATAC
GTTGAGCTGG TGGACGCTGA TCACTTTTCA GACACTTTGT TTTATGAACA TAAAATGGCG
TTTTACTCAG AACTTATTGA TTGGTTAGAC AATAAGTGCG GTCTGAAGTA A
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| Protein sequence | MKKFLLSLTA VTCMASQPLY AEPVTAQSQA VSTIEAFSTA PLIRSVAVSS DGTKVAIIRA
TSKEGDYVIE IRDTSKLDAQ PIVLGANRMM VSGVVWLNND KIGVMFRQIL KDGARRYWVN
RFAITDADGK GDWLIPFQNN PRAGFSILNT LPDNKDEILV ETDLNNNYKP DVVRFNVNNG
RTVSVLRGSD KISGGYISDA DGDVRAATGW NLSDNAIDLY ARAKGDSDWK LVKQISPKSR
ESYSFIGFSK ENPDEIYVNA NQGQDKTGIY LYNIKTGQYS ERLFGLENVD ADGVIQKKDG
SLVGFGYSAK WPQRYLTDAN EQAIYDGLDK LFEGKFVSII SRSNDDSVMV VSASSDKDPG
TYYLVLNKSK IETIGSKLPF VDQEKLGSVK YISYKARDGR KVYAYVTLPK GKGPFPAVVL
PHGGPWVRDT IVFDDWAQLL ASNGYVVIQP NYRGSTGYGI EHWTAGDNNW GLKMQDDLDD
AAMYLVEKGL ATKDKLAMFG WSYGGYAAFA ASMRDNNIYQ CTVAGAGVSD LSKINATLNE
NRFLSRLQRP TITGVSPLSQ VEKVNVPILV VHGDIDGRVP VAHSREFVEK LKDLKKDHKY
VELVDADHFS DTLFYEHKMA FYSELIDWLD NKCGLK
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