| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1999 |
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| Symbol | |
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| ID | 4604249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2428478 |
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| End bp | 2429407 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639781376 |
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| Product | ribosomal protein S6 modification protein, putative |
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| Protein accession | YP_927874 |
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| Protein GI | 119775134 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000304708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.227031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGGCT GGATTTTATA TAAAGAAACC GCGACTCAGC TCAAACCCGA ACTGTACGAA
ATTCAACGTC TGTTGGACGC CGCCAAGGCG GACAACATAG ATCTGCAGGT CTATGCCCCG
GACGAGTTTG ATTTGACCGT TACCCGGGAA GACAACAAGA GTATTTTGCT TAATGGGCAG
CCGGTTGAGC TGCCCGATTT TATTATTCCC CGCATGGGTT CAGGCACGAC CTATTTTGCG
CTGGCGATTA TTCGTCACCT TGAGCGCTTG GGCGTTTACA GCCTCAACTC ATCACGGGCT
ATCGAGACCG TAAAAGACAA ACTCTTCTCA CAGCAGCTAT TGGCCGAAAA AAATCTGCCA
ACGCCCAAAA CCATGCTGGT GAAGTTCCCG GTGGATATAG AACTGGTGCA AAGCCATTTG
GGCTTTCCTG TGGTGATAAA AACCTTGTCC GGCTCCCAGG GCAGTGGTGT GTTTTTGTCA
CATAAACCAC GGGAGTTTGA CGATCTGATG CAGTTGATTG AGGCCACCAA TAAAAACGCC
AACATCATAT TGCAGGAGTT TATTGCCAAC AGTCATGGAC GGGATCTTCG GGTCTTTACC
ATTGGCGGGC GAGTCGTGGG CTGTTTTGAG CGGCGTGCGG CGGAAGACAG CTTCAAGGCC
AATGTCAGTG CCGGTGGAGC CGCGCTTCCC TTTGAGGTCA CCCCCGAGAT TGAATGGCTC
GCGACCCAAA CAGCCAATAT CCTCGACCTG GATGTGGCTG GTATCGACTT ACTGTTCGAT
AACGGTCACT ACAAAATATG TGAAGCCAAC TCCTCACCGG GATTCGAAGG TCTCGAATCT
TGCCTTAATG TGGATATCGC ATCACAAATC CTCCACTTTA TTCGCATCCG GCTTGGGATG
TTCAATAAAG AAGACCAACA CTCAATATGA
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| Protein sequence | MRGWILYKET ATQLKPELYE IQRLLDAAKA DNIDLQVYAP DEFDLTVTRE DNKSILLNGQ
PVELPDFIIP RMGSGTTYFA LAIIRHLERL GVYSLNSSRA IETVKDKLFS QQLLAEKNLP
TPKTMLVKFP VDIELVQSHL GFPVVIKTLS GSQGSGVFLS HKPREFDDLM QLIEATNKNA
NIILQEFIAN SHGRDLRVFT IGGRVVGCFE RRAAEDSFKA NVSAGGAALP FEVTPEIEWL
ATQTANILDL DVAGIDLLFD NGHYKICEAN SSPGFEGLES CLNVDIASQI LHFIRIRLGM
FNKEDQHSI
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