| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1995 |
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| Symbol | |
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| ID | 4604245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2425326 |
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| End bp | 2426174 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781372 |
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| Product | DNA ligase |
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| Protein accession | YP_927870 |
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| Protein GI | 119775130 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0244293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.371724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCACTTA CCTCCAGTCT TGCGCCTTCG AATACGGCAA CCGGCGCAAA CCCGCCCAAC
AGCGCGGCTC CGCTTGCGGG TTCACTGCAA CTCGCATCCA GTAAGCCTTT ACCCCCAGAG
TCTGAGTTGC CTCGATATCT TGTAAGCGAA AAACTGGATG GTGTCAGGGC CCGCTGGACA
GGCCAAACGC TGGTCACCCG CTCTGGCAAT CTAATCGCCC CGCCCGCCTG GTTTATTGCG
GCCTTGCCGG CAGATGTTCT CCTTGATGGC GAGTTATGGG CCGGCAGAGG CCGTTTTGAG
TGGTTGAGTG GATTGGTACG CTCACGCGGT CGTGATGATG ATTGGTATCA GGTGCAATTA
ATGGTGTTTG ACACACCCCA ATCCGGGCTC GGATTTGCTG AGCGACACAA GTGGTTGCAA
GCTCGACTCT CCGACAAAAC CGAGCCGCTC AAGCTGGTGG AACAAAGGCG CTTCCAGCAT
CTCTCTGAGC TCAATGACTA TTATCAAGCC GTCATTCGAG GAGGGGGTGA AGGATTGATG
CTGCATCGGG AAGATGCCCT TTACATTGAC GGTCGCAATC CACTGCTCAT CAAGCTTAAG
CCTCTGAATG ATACCGAAGG GCAGGTGATT GGCTACCGTG CGGGAAAAGG CCAATTTGAG
GGCATGATGG GGGCGCTGCA CCTGCGTCTT TTGGATGGCA GAGAGTTTTT TCTGGGCTCT
GGTTTCAGCT TTGATGAGCG CCGTCATCCT CCTGCCATTG GCGCTTGGGT CACTTTTCAA
TATCATGGGC TCACTGATAA AGGGCTTCCC AAGGGCGCGC GATTTCTGCG TGTGCGTCCG
ATGGAATGA
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| Protein sequence | MPLTSSLAPS NTATGANPPN SAAPLAGSLQ LASSKPLPPE SELPRYLVSE KLDGVRARWT
GQTLVTRSGN LIAPPAWFIA ALPADVLLDG ELWAGRGRFE WLSGLVRSRG RDDDWYQVQL
MVFDTPQSGL GFAERHKWLQ ARLSDKTEPL KLVEQRRFQH LSELNDYYQA VIRGGGEGLM
LHREDALYID GRNPLLIKLK PLNDTEGQVI GYRAGKGQFE GMMGALHLRL LDGREFFLGS
GFSFDERRHP PAIGAWVTFQ YHGLTDKGLP KGARFLRVRP ME
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