| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1992 |
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| Symbol | |
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| ID | 4604242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2422789 |
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| End bp | 2423628 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781369 |
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| Product | isopenicillin-N synthase |
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| Protein accession | YP_927867 |
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| Protein GI | 119775127 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3491] Isopenicillin N synthase and related dioxygenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.254855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.142009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGG AAACTATTGA TTACCGCTCG CCCGACGCGG CAGCACAATT CGTTCAATCA
TTGCGGGATA CCGGCTTTGG CGTATTGTCA AACCACCCTA TTCAGCAATC TTTGGTCGAA
GCCATTTATA AAGATTGGTA CGAATTCTTC CAGAGTGGTG CCAAGGAAGA ATTTCGCTTC
AATCCGGAAA CCCAGGACGG ATTTTTCCCG GCAGATGTGT CGGAAACGGC CAAAGGTCAC
AGTGTAAAAG ACATAAAAGA GTACTACCAC GTTTACCCGT GGGGCCGTAT ACCCGAGAGC
CTCAGAGCCA ACATTCTGGC CTACTATGAC CACGCCAATC AGCTGGCGGC CGAATTGTTG
TCCTGGGTTG AAGCTCACAG CCCGGATGAA GTGAAGGCTC TCTTTACCGA GCCACTGCCA
AACATGATAG ATGGTAGCCA CAAGACCCTG CTGCGAGTGC TCCACTATCC CCCCATGAAG
GGTGATGAAG AGCCGGGAGC CATCCGCGCC GCCGCCCATG AAGACATCAA CCTGCTTACC
GTGTTGCCTG CCGCCAATGA ACCCGGGCTG CAAGTAAAAG CCAAAGACGG TACCTGGCTG
GATGTCCCTT CAGATTTTGG CAACATTATC ATCAACATCG GTGACATGTT GCAGGAAGCC
TCCGGCGGTT ACTTCCCATC GACTTCCCAC CGGGTAATTA ACCCCGAAGG CATGGACAAA
ACCAAGTCGC GGATTTCCCT GCCACTGTTT TTACACCCTC GCCCTGACGT GGTGCTGTCG
GAGCGTTATA CCGCCGACAG CTATTTGATG GAGCGTCTGC GCGAGCTCGG CGTCATCTGA
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| Protein sequence | MKLETIDYRS PDAAAQFVQS LRDTGFGVLS NHPIQQSLVE AIYKDWYEFF QSGAKEEFRF
NPETQDGFFP ADVSETAKGH SVKDIKEYYH VYPWGRIPES LRANILAYYD HANQLAAELL
SWVEAHSPDE VKALFTEPLP NMIDGSHKTL LRVLHYPPMK GDEEPGAIRA AAHEDINLLT
VLPAANEPGL QVKAKDGTWL DVPSDFGNII INIGDMLQEA SGGYFPSTSH RVINPEGMDK
TKSRISLPLF LHPRPDVVLS ERYTADSYLM ERLRELGVI
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