| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1961 |
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| Symbol | |
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| ID | 4604211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2389402 |
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| End bp | 2390040 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781338 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_927836 |
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| Protein GI | 119775096 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.985992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.113266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATC TCAGCGACAT TCGCCGTGAA TACACCAAAG GCGGCCTCAG GCGCAGCGAA
TTGCCCGAAG ACCCCATGGC ATTGTTTGAG CGCTGGATGG AGCAGGCCAA GGCCGCAGAG
CTTACCGACC CCACGGCCAT GTGTGTGGCG ACAGTCGATG AGCTAGGCCA ACCCTATCAA
CGGATAGTGC TTCTCAAACG CTTCGACGAG CAGGGTTTTG TATTTTTCAC CAATCTGGGT
AGCCGCAAGG CGACTCAACT GAAGCATAAC GCCCACATCA GCTTGCTCTT TCCCTGGCAC
CCTCTGGAGC GACAGGTGGC TGTGACAGGC ATTGCCGAAC CACTTTCAAC GGCTGAGGTA
CTCAAGTACT TCGTTACCCG ACCGAAAGAC AGCCAGATTG CAGCCTGGGT ATCTGCTCAG
TCATCCAAAC TCAGTGCCAG GCAGGTCCTG GAAGCCAAGT TTATGGAGAT GAAGCAGAAG
TTTTCCGCCG GTGAAGTGCC ATTGCCATCT TTCTGGGGCG GCTATCTGGT CCGTCCCGCC
AGTATTGAGT TCTGGCAGGG CGGGGAACAC AGGCTGCACG ACCGCTTTAT TTATGAAAAA
ACGGCGGCGG GTTGGGATAT TGAGCGCCTG GCGCCCTGA
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| Protein sequence | MTDLSDIRRE YTKGGLRRSE LPEDPMALFE RWMEQAKAAE LTDPTAMCVA TVDELGQPYQ
RIVLLKRFDE QGFVFFTNLG SRKATQLKHN AHISLLFPWH PLERQVAVTG IAEPLSTAEV
LKYFVTRPKD SQIAAWVSAQ SSKLSARQVL EAKFMEMKQK FSAGEVPLPS FWGGYLVRPA
SIEFWQGGEH RLHDRFIYEK TAAGWDIERL AP
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