Gene Sama_1926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1926 
Symbol 
ID4604176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2355121 
End bp2355630 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content53% 
IMG OID639781303 
Productdisulfide bond formation protein B 
Protein accessionYP_927801 
Protein GI119775061 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1495] Disulfide bond formation protein DsbB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00145643 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGCC TGATTTCGTT TGCCCACAGC CGTCTGTCCT GGGGCATTCT CGCCTTAAGC 
GCCCTCGCCC TGGAATCTGC CGCACTCTAT TTTCAGCACA TTATGAAGCT CGACCCCTGC
GTCATGTGTA TTTATCAGCG AGTTGCCGTA TTCGGTCTGC TTGGTGCAGG TCTATTTGGG
TTCATGGCGC CGGCTAATAG GGTTATTCGC GCGCTTGGTG CGCTTCTGTG GGGGATTTCC
GCTGCATGGG GACTTAAGCT TGCGCTTGAG CTGGTTGATA TGCAAAACAA CCCTAACCCA
TTTTCAACCT GCTCATTCCT GCCGGAATTT CCGAGCTGGT TACAATTGCA TGAATGGCTA
CCCAGTGTGT TTATGCCCAC AGGTATGTGC ACCGATATTC CCTGGGAGTT TGCCGGGGTC
ACCATGGGTG AATGGATGAT AGTGGCTTTC AGCGTGTACT TGCTTGCCTG GCTCGCGTTT
ATCGTGCCAA TGCTGAAGAA GTCTGCCTGA
 
Protein sequence
MQSLISFAHS RLSWGILALS ALALESAALY FQHIMKLDPC VMCIYQRVAV FGLLGAGLFG 
FMAPANRVIR ALGALLWGIS AAWGLKLALE LVDMQNNPNP FSTCSFLPEF PSWLQLHEWL
PSVFMPTGMC TDIPWEFAGV TMGEWMIVAF SVYLLAWLAF IVPMLKKSA