Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1924 |
Symbol | |
ID | 4604174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2352404 |
End bp | 2353126 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639781301 |
Product | fatty acid metabolism regulator |
Protein accession | YP_927799 |
Protein GI | 119775059 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | [TIGR02812] fatty acid metabolism transcriptional regulator FadR |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000876108 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAATCA ATGCCAAAGG TCCTGCGAGT TTCGCAGAGA AATACATAGT GCGTTCCATT TGGGAAAATA AATTTCCCCC TGGCTCCATT CTTCCTGCCG AGCGTGAGCT TTCAGAGCTT ATCGGTGTAA CCCGTACCAC ATTGAGGGAA GTGTTGCAGC GTTTGGCCCG CGATGGCTGG CTCACTATCC AGCACGGTAA GCCAACCCGG GTAAATAATT TCTGGGAAAC GTCAGGCCTG AATATTTTGG AAACCATTGC GGACTTGAAT CCTGAGGGGT TTCCGGTGTT GGTTGACCAG TTGTTATCGG CCCGAACGAA TGTCAGCGCT ATCTATTTCC GTGGCGCACT GCGTCACAAT CCAGAAACCG CAGTAGAAAT CCTTGCCCGT ATCCATGGTA TGGAAGATTC GGCTGAAGCA TATGCTGAGT TCGATTACGA TTTGCATCAC ACGCTAGCCT TTTCATCGGG TAACCCGCTT TATGTGTTAA TCCTGAACGG TTTTAAAGGA CTTTACAGTC GGGTAGGCCG CTATTACTTC TCCAGCGCTG AAGCACGAAA GTTGGCGATG GATTTTTATA TTGAGCTGGA AAAGCTGGCA AAGCGTCATG CGTACGGGGA AGTACCGGCG CTGATGCGAA GCTATGGCAT TAACAGCGGC AAAATGTGGC AAAAGCTGAA AGACGCCATG CCCGCTGATA TTAATCAGGA TCCACACGGT TAA
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Protein sequence | MIINAKGPAS FAEKYIVRSI WENKFPPGSI LPAERELSEL IGVTRTTLRE VLQRLARDGW LTIQHGKPTR VNNFWETSGL NILETIADLN PEGFPVLVDQ LLSARTNVSA IYFRGALRHN PETAVEILAR IHGMEDSAEA YAEFDYDLHH TLAFSSGNPL YVLILNGFKG LYSRVGRYYF SSAEARKLAM DFYIELEKLA KRHAYGEVPA LMRSYGINSG KMWQKLKDAM PADINQDPHG
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