Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1916 |
Symbol | |
ID | 4604166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2342655 |
End bp | 2343380 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639781293 |
Product | DNA replication initiation factor |
Protein accession | YP_927791 |
Protein GI | 119775051 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.139395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGAAGTA ACCGAGTGAC ACAACATCCC CCATTGCAGT TGTCCCTGCC TGTACATTTG CCAGACGATG AGACCTTTAC CAGTTATTAC CCCGCGGCGG GTAACGACGA GCTTATCGGT GCGCTGAAAT CGGCGGCAAG TGGCGATGGG GTGCAGGCTA TTTATTTGTG GGGACCGGTC AAGTCGGGAC GCACCCATCT TATCCATGCG GCCTGCGCCC GTGCCAATGA GCTGGAGCGC CGCAGTTTCT ATATTCCGCT CGGAATTCAC GCCAGTATTT CCACGGCCTT GTTGGAAGGG TTGGAGCAGT TTGACCTTAT CTGTATCGAT GATGTAGATG CGGTGGCTGG TCACCCCCTG TGGGAAGAGG CGATATTTGA TCTCTACAAC CGGGTAGCAG AGCAAAAACG TGGCAGTTTG ATAGTCAGTG CCAGTGCTTC GCCCATGGAG GCGGGTTTTG TGCTGCCGGA TCTCGTGTCC AGAATGCATT GGGGGCTGAC TTACCAGCTC CAGCCTATGA TGGACGATGA GAAACTCGCG GCATTGCAAC GCCGTGCTGC CATGCGCGGA CTCCAGTTAC CTGAAGACGT GGGGCGGTTC TTACTTAATC GCATGGCGCG AGATTTACGC ACACTGTTTG ATGTCCTCGA CCGGCTTGAT AAGGCGTCCA TGGTTCATCA GCGCAAGCTG ACCATACCTT TTGTCAAAGA GATGCTGAGG CTGTAA
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Protein sequence | MRSNRVTQHP PLQLSLPVHL PDDETFTSYY PAAGNDELIG ALKSAASGDG VQAIYLWGPV KSGRTHLIHA ACARANELER RSFYIPLGIH ASISTALLEG LEQFDLICID DVDAVAGHPL WEEAIFDLYN RVAEQKRGSL IVSASASPME AGFVLPDLVS RMHWGLTYQL QPMMDDEKLA ALQRRAAMRG LQLPEDVGRF LLNRMARDLR TLFDVLDRLD KASMVHQRKL TIPFVKEMLR L
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