| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1908 |
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| Symbol | |
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| ID | 4604158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2336495 |
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| End bp | 2337376 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781285 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_927783 |
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| Protein GI | 119775043 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0114932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAACG GAAGCATCGT AGCCTTAATC ACGCCTATGA ACAGTGATGG CTCAGTGGAT
TTTGCAAGTC TTGAGAGTTT AGTCGAGTTT CATATCGCCA ATGGCACCGA CGCCATTGTG
GCCGTGGGGA CCACGGGCGA ATCGGCTACT CTGCCAATGA AAGAACACAT CAATGTGGTA
GCCAAAACCG TTGAGTTTGC CAAGGGCCGT ATTCCGGTTA TCGGCGGCAA CGGCGCTAAT
GCCACTGCCG AGGCAATCGA GCTGACCCAG GCCCTGTCTG CAACTGGTGT TGCGGCCATG
CTGGGGGTGA CGCCTTATTA CAACAAGCCC ACGCCTAAAG GCCTGGTTGC CCACTATAAA
GCGGTGGCTG CAGCTACTGA CATTCCGCAA ATTCTGTATA ACGTGCCCGG CCGTACTGCG
CTGGACTTGA AGCCTGAGAC TGTTGCTGAG CTTTGCGACG TGGCTAACAT CATCGGCATC
AAAGAAGCCA CGGGTGATGT GAGCCGTGTA GCCCGCCTGC GTGAACTCTG CGGCCCCGAC
TTTTTGCTGT ACAGCGGCGA TGATGCCACT GCACGTGAGT TTTTGCTGGC TGGCGGTGAT
GGGGTGATTT CGGTTGCCAA CAACATAGTG CCTGCTCAGT TTAAAAAGAT GTGCGCACTG
GCGCTGGCCG GTGACATCGA GGGCTCTTTG GCGGCCGATG AACCCATGCG TGGTCTCTAC
AGCACACTCT TTTGCGAAGC CAACCCTATC CCGGTGAAAT GGGCTGCCCA TCGTATGGGA
CTCATCAAGG AGGGTTTTAT TCGTTTGCCA CTGACTGAAC TTTCTGAGTC CTGCCATGGT
CTACTGCTCG ATGCCATGAA AAAAGCTGGA CTGGAGGTCT AA
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| Protein sequence | MINGSIVALI TPMNSDGSVD FASLESLVEF HIANGTDAIV AVGTTGESAT LPMKEHINVV
AKTVEFAKGR IPVIGGNGAN ATAEAIELTQ ALSATGVAAM LGVTPYYNKP TPKGLVAHYK
AVAAATDIPQ ILYNVPGRTA LDLKPETVAE LCDVANIIGI KEATGDVSRV ARLRELCGPD
FLLYSGDDAT AREFLLAGGD GVISVANNIV PAQFKKMCAL ALAGDIEGSL AADEPMRGLY
STLFCEANPI PVKWAAHRMG LIKEGFIRLP LTELSESCHG LLLDAMKKAG LEV
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