| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1904 |
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| Symbol | |
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| ID | 4604154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2329003 |
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| End bp | 2330724 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781281 |
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| Product | AMP-binding domain protein |
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| Protein accession | YP_927779 |
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| Protein GI | 119775039 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATGC CCTCAGACCA CACAGCGCCC AACCCTCTTC CACTTACCCA GAGCCATTAT
CTCGGCAGCG ATGCCCCTGA GCTGATTCAG GACACCATAG GCCGCTACCT TGAATGCATT
GCCAACCGCT ATCCAGATCA CGAAGCCATT GTCATGCATC ATCAGAACAT CCGCTGGAGC
TATCGACAGT ATCTGACCGA AATCGACCGA TTGGCTACAG GCCTTTTAGC GCTGGGGATA
GGTCCCGGTG ATAGGGTCGG TATTTGGTCA CCCAACAATA TTGAATGGTG TTTGACCCAA
TTCGCCACCG CCCGCATCGG CGCCATCATG GTGTGTATTA ATCCCGCTTA CCGCCCCGAA
GAGCTGGAGT ACGCGCTGGT CAATGTGGGC TGCAAGGCCC TTATCACCCA CGACAAATTT
AAAAGCAGTG ATTACCTGGC GATGTTGCAA TCGCTGGCGC CGGAGCTGGC TCACTGTGAA
GCAGGACAGC TGCAATCGAG CCGCTTACCG GACCTTAAAT TGGTGATCCG TACCGGCAGT
GAGGCAACGC CGGGCATGCT GAACTTTGAT AAGGTGTGTA GCCTCGGAAG CGATGCCGAA
TATGCTGACC TTCAAGGGAT AAGCGAAAAA CTCTCCCCTT TCGATCCCAT CAATATCCAG
TTTACGTCGG GCACCACGGG TAACCCCAAG GGCGCGACCC TGTCTCACCA CAATATCCTC
AATAACGGCA TGTTGGTGGC AAAGGGAATG CGCTTCAGTC ATCTGGACAG GCTTTGCATT
CCGGTGCCGC TCTATCACTG CTTTGGTATG GTGCTGGGTA ATCTGGTGTG TGTCGCCACA
GGTGCCACGG CCGTTTTTCC CGGCGATGCC TTTGACCCAG CCACTACACT TGCCGTCGTC
GAAAAAGAGC ACTGCACGGC ACTGCACGGC GTGCCCACCA TGTTTATTGC CGAGTTGGAG
CTCGCCAACT TCAACGATTA CGATCTCTCA AGCCTGCGCA CCGGCGTTAT GGCCGGCGCC
ACCTGCCCCG AGGAAGTGAT GAAACGGGTA CAGACCCTGA TGCACATGCA GGAGGTGGTG
ATAGGTTATG GTCAAACCGA ATGCAGCCCC ATCAACAACC TCACCGAAAT CGACTCTTCA
TTGGAGCTCA GAGTCACCAC CGTGGGCCGG GCGCTCGCCC ACACCGAAGT AAAAATCGTC
GATGTGTTTG GCAAAACCCA ACCCATTGGT GAGCCGGGCG ATGTATGCAG CCGGGGTTAT
TGTGTGATGC TGGGATATTG GAATGACGAT GCCAAAACCC GCGATACCAT AGACAGCGAG
GGTTGGCTGC ATTCAGGTGA CCTTGGCGTG ATGGATGAGC ACGGTTATGT ACGCATTGTC
GGGCGGATAA AGGACATGAT CATCCGCGGC GGCGAGAACA TCTATCCCCG GGAAATCGAA
GAGAAGCTCT TTACCCATCC ACAGGTGCAG GACGCCGCCG TATTCGGGGT GCAGAGCGAT
AAGTATGGCG AAGAGGTTTG TGCCTGGATA AAGCTGCGCC CGGGCGCCAA CCTGGACGAG
CAGGAAATCC GCCACTTCCT CACCGAAAAA GTGGCCTACT TCAAGGTGCC AAGGTACATC
AAGTTTGTTG AGAGCTATCC GATGACAGTG ACCGGCAAAC TGCAAAAATT CCGCATGCGC
GAATTGATGT ACGAAGAGCT TTATCAGGAT ATCAATCGCT AA
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| Protein sequence | MHMPSDHTAP NPLPLTQSHY LGSDAPELIQ DTIGRYLECI ANRYPDHEAI VMHHQNIRWS
YRQYLTEIDR LATGLLALGI GPGDRVGIWS PNNIEWCLTQ FATARIGAIM VCINPAYRPE
ELEYALVNVG CKALITHDKF KSSDYLAMLQ SLAPELAHCE AGQLQSSRLP DLKLVIRTGS
EATPGMLNFD KVCSLGSDAE YADLQGISEK LSPFDPINIQ FTSGTTGNPK GATLSHHNIL
NNGMLVAKGM RFSHLDRLCI PVPLYHCFGM VLGNLVCVAT GATAVFPGDA FDPATTLAVV
EKEHCTALHG VPTMFIAELE LANFNDYDLS SLRTGVMAGA TCPEEVMKRV QTLMHMQEVV
IGYGQTECSP INNLTEIDSS LELRVTTVGR ALAHTEVKIV DVFGKTQPIG EPGDVCSRGY
CVMLGYWNDD AKTRDTIDSE GWLHSGDLGV MDEHGYVRIV GRIKDMIIRG GENIYPREIE
EKLFTHPQVQ DAAVFGVQSD KYGEEVCAWI KLRPGANLDE QEIRHFLTEK VAYFKVPRYI
KFVESYPMTV TGKLQKFRMR ELMYEELYQD INR
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