| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1884 |
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| Symbol | |
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| ID | 4604134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2299143 |
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| End bp | 2299919 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639781261 |
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| Product | hydroxyacylglutathione hydrolase |
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| Protein accession | YP_927759 |
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| Protein GI | 119775019 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000396006 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGATA TTCGCCCCAT TCCCGCGTTC GCGGACAACT ACATTTGGAT GATTGTACTG
CCTGATGGTG GTGCTGTTGT GGTCGACCCA GGCGATGCAA TGCCTGTGAT AAACACCCTC
CAACGCTTGA ACCTGCAATT AACTGCGGTG CTTTTGACCC ATCACCATAG AGATCATAAT
GGTGGCATAA ACCAACTACG TGACTGGGCA AAGTCAAATG GGCAATCGTT CACTGTCTAT
GGCGCTGTAA CCTCCGATTA CAGTGACGTT CTTTGCCGTG ACGGCGATAC TGTCGACATT
TCGGGCTTGA CCAGCCCTGT CAGAGTACTG TCGGTGCCGG GCCACACACT GGACCACCTG
GCCTTCGTGG TAGACAACGC CCTTTTTTGT GGAGACACCC TGTTCAGTGG CGGATGTGGC
CGGTTATTTG AAGGTGATGC GGGTCAACTT TACGATTCAC TGGCAAAGTT AGCATCTCTT
CCCGATGACA CCCTCGTTTA TTGTGCCCAC GAATATACCC TCTCCAATCT GAGGTTTGCG
CTGGCAGTGG AGCCACAAAA TCAATGTCTT CAGGATTACG TTAAGCAGGT GAACAACCTA
CGTGAAGCCA ACAAGCCTTC ACTGCCAAGC ACCCTTGGAA CCGAGAAGGC AATCAACCCT
TTTTTGAGGG TAGATACAGC AACTGTTCAC GCCGCTGTCG CGGCACAAGC TGGACAAAAA
GTGCCAGATG AAGTGACCTG CCTCGCCCTT TTGCGCCGTT GGAAAGACAA TTTTTAA
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| Protein sequence | MLDIRPIPAF ADNYIWMIVL PDGGAVVVDP GDAMPVINTL QRLNLQLTAV LLTHHHRDHN
GGINQLRDWA KSNGQSFTVY GAVTSDYSDV LCRDGDTVDI SGLTSPVRVL SVPGHTLDHL
AFVVDNALFC GDTLFSGGCG RLFEGDAGQL YDSLAKLASL PDDTLVYCAH EYTLSNLRFA
LAVEPQNQCL QDYVKQVNNL REANKPSLPS TLGTEKAINP FLRVDTATVH AAVAAQAGQK
VPDEVTCLAL LRRWKDNF
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