| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1882 |
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| Symbol | |
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| ID | 4604132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2297333 |
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| End bp | 2298241 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781259 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_927757 |
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| Protein GI | 119775017 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0108244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATGA CCCTCAGGCA GCTTGAGGTG TTCGAAGCCA TTGCCCGCTC GGGGCAGGTG
AGTAAAGCCG CTCAGTGGCT TGGGATGACG GGGCCGGCAG CCTCAATGGC TCTCGCAGAG
CTTGAAAAGC AACTGTCAGT GCGACTCTTT GAACGTGTTG GCAATCGGCT GCGACTTAAT
GCTCAGGGCG CACAGCTGCT GCCTCTTGCC ACCGAGCTGT TGGCTCAGGC ATCCAAAGTT
GAAGCCCTGT TTAATGCCAG CGGCGCAGTG TTGGCCGGTG AGCTTAAAGT CGGTGCCAGT
ACCACTATTG GCAATTTTCT GCTGGCCAAG GCCGCGGTGG CGTTCGGTCA GCAGCATCTG
GATGCTCTGG TGGACGTGTC TATTCACAAT ACCTCTGCGG TTATCGAACA GGTGGCTAAC
TTTGAGGTGG AGCTTGGCTT TATTGAAGGC CACTGTGTGG ATCGCAGACT GGATGTCCGC
GCCTGGCATC AAGACCATTT GTGTGTTTTT TGTCATCCGG CCCACCCGTT GGCAGGGCGA
AAGGTCTCGG TCGATGAGGT CAGGCAGCAA TACTGGGTGC TGAGGGAAGA GGGCTCTGGT
ACGCGGGAAC ATTTTGTCAA CGCAGCCCAT GCACTCGGGC TGCATCCCGA GGCGCGGTTT
TGTTTTTCAA CCGCTGATGC CATCAAACTC GCGGTAAAAC AGGGGGCAGG GCTTGGCGTG
TTATCTGAAT TGGCACTTGA GCGGGAACTT GCCCGCCGTG AGCTCGCCCT GATTGAAGTG
ACCGGCCTTT CCATTACCCG GCCATTCTTT CTTATCCGCC ACAAAAGCCG GCAATCAACG
GCACTTGCCA ATGCGTTTGT GCAGTTTTGT CAGAACTTTT TCAATATTCA GGAAAGGCCG
GTAGTCTAG
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| Protein sequence | MKMTLRQLEV FEAIARSGQV SKAAQWLGMT GPAASMALAE LEKQLSVRLF ERVGNRLRLN
AQGAQLLPLA TELLAQASKV EALFNASGAV LAGELKVGAS TTIGNFLLAK AAVAFGQQHL
DALVDVSIHN TSAVIEQVAN FEVELGFIEG HCVDRRLDVR AWHQDHLCVF CHPAHPLAGR
KVSVDEVRQQ YWVLREEGSG TREHFVNAAH ALGLHPEARF CFSTADAIKL AVKQGAGLGV
LSELALEREL ARRELALIEV TGLSITRPFF LIRHKSRQST ALANAFVQFC QNFFNIQERP
VV
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