Gene Sama_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1881 
SymbolrnhA 
ID4604131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2296821 
End bp2297291 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content55% 
IMG OID639781258 
Productribonuclease H 
Protein accessionYP_927756 
Protein GI119775016 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.025157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC TGAAACAGAT CCGTATCTAC ACCGACGGTT CCTGTCTGGG TAACCCCGGT 
CCCGGTGGAT ACGGCGTGGT CATGATCTAT AAGCAGCACC GCAAAGAACT CGCGGATGGC
TTTGCCCTGA CAACCAATAA CCGTATGGAG CTGCTGGCCC CCATAGTGGC ATTGGAAAGC
CTTAAGGAAC CCTGCGATGT GATCCTGACC AGTGACAGCC AATATATGCG TCAGGGCATT
ACCGAATGGA TCCATGGCTG GAAGAAAAAG GGCTGGGTGA CTGCCAGTAA AACGCCGGTC
AAGAATGTGG ATCTGTGGCA ACGCCTCGAT GCCGCAGCCG CCAAGCACAA GGTGGATTGG
CGCTGGGTGA AAGGCCATGC GGGCCACGCC GAAAACGAAC GCTGTGACAC TCTTGCCCGT
GAAGCGGCCG AAGCAAAACC GACTCAAATT GATAAGGGCT ATCAGCCCTG A
 
Protein sequence
MSELKQIRIY TDGSCLGNPG PGGYGVVMIY KQHRKELADG FALTTNNRME LLAPIVALES 
LKEPCDVILT SDSQYMRQGI TEWIHGWKKK GWVTASKTPV KNVDLWQRLD AAAAKHKVDW
RWVKGHAGHA ENERCDTLAR EAAEAKPTQI DKGYQP