| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1876 |
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| Symbol | |
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| ID | 4604126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2291278 |
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| End bp | 2293101 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781252 |
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| Product | peptidase S8/S53 subtilisin kexin sedolisin |
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| Protein accession | YP_927751 |
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| Protein GI | 119775011 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1404] Subtilisin-like serine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.747842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAG TGAATAAAAC CCTATTAGCA CTGGGTATTG GTATGGCCAT GGCCGCCAAT
GCCGCCGATG ACAGATACGT TATTCAGGTA GATGCCGGGC ATAAAGGCGT GGTGAAGGCC
CTCGCCAAAC AACTGGGCGG TAAAATTCAC GCCGAGGGCA ATCGCTTTTT CTCAGCCACC
TTCAGCGGCA AAGATCTTGC GACCGTAAAA GGGTTATTGA ACAACCCACA CATTCAACTC
ATCGAAGAAG ATGCCAAACG GGAACTGATG GGCTACAGCG ACGATGTGGG CGATCCGCGC
AATACACAAA TCACCCCTTA TGCAGTCTAT CAATCTCAGG CTAATCAACT CACGCTCCAG
GCAAACTCAG GCGTCAAAGT CTGTGTAATT GACTCAGGGC TCGATCGTTC AAACCCCGAC
TTCCTATGGC AAAACATCAC GGGTGACAAC GACCCCGGCA CCGGCAATTG GGATCAAAAT
GGTGGCCCCC ACGGCACCCA CGTTGCCGGC ACCATAGGTG CAGCCGATAA CGGCTTTGGC
GTGGTTGGCA TGGCGCCGGG TGTCGACATG CACATCATCA AGGTATTTAA CGCCAATGGC
TGGGGCTATT CATCCGATCT TGCACTTGCC ACCGAGAAGT GTGCTGCAGC AGGGGCAAAC
ATCATCAATA TGAGTCTGGG TGGTGGACGT CCCAACAGTA CAGAAGAGAA TGCCTTCAAG
GAGTTCACCA AAAATGGCGG CCTGGTGATT GCAGCAGCAG GTAACGACGG TAACAACGTC
AGAACCTACC CGGCTGGCTA TGAGTCAGTC ATGATGATTG GCGCCAACAA TGCCAATGAT
GCAATCGCGG ACTTTTCCCA GTTTCCTGCC TGCACCATTA TCTACTCAGG TAAGGGCAAC
AAGAATAATC AGCAGATTAT TGATACCACC TGCGTGGAAG TCACCGCAGG GGGCGTTGAT
ACCCTGTCCA CCTACCCTGC CGATATGGCG GTAGCGTCGG TATTAAACGC TGATGGTCAG
GTACTTGGCT CTACCGGAAT GGGCTACGCT GAACAAGGCA ATGTCACCGG CAGCGGCTAT
TACATGGGCC TTGGCAAGGC AATAGATTCA GGCGCCGACG GAAAGGTCTG CCTGATTGAT
AGAGGCGAAA TATCTTTTAA TGACAAAGTC ATGAATTGCC AAGCCTCCGG TGGTATTGCT
GCCGTTATCA TCAATAACGT TGCGGGTATG CTGTATGGCA CCTTGGGCGC CGACACCACA
ACCGGTATTC CGGCCGTTGG CGCCACACTG GAAGACCGCA GTGCTATCCT GGCTGCAACC
TCAGTTGGCG TAGAGATCAG TAGCTCAGAT TATGGCTTTA TGAGCGGAAC CTCCATGGCG
ACCCCAGCCG TGAGTGGTTT GGCAGCCTTA TTGTGGTCGA ACCATCCAGA ATGCAGTGGC
AATGACATTC GCGCAGCGCT TAAAGCAACA GCCTTTGATG CCGGCGCCAC CGGGAGGGAT
GACTACTTTG GTTATGGCAT CGTCAAAGTG GCCGACGCCC ATCAATACCT GTTGAGCAAC
CACTGCAGTG CCAAACCCAT GGTAGACATC CAACTCACCA CGGCTACGTA CTCAGGCAAA
CGCGGAGAAC AGGTTGAACT TAATTGGTCG GGCGCCTCAA CCCGCAAGGT CAATGTGTTT
CGTAATGGCG TGGTAATTAC CGCCACTGCC AACGATGGTA ACTTTGTTGA TACGCTCAAC
AACCCTTATG GCATCTACAC TTACCAAATC TGTGAAGATG GCACCGCGAA CTGCTCTGAC
ATTTCAAGCG TGACATTCAA CTAA
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| Protein sequence | MKTVNKTLLA LGIGMAMAAN AADDRYVIQV DAGHKGVVKA LAKQLGGKIH AEGNRFFSAT
FSGKDLATVK GLLNNPHIQL IEEDAKRELM GYSDDVGDPR NTQITPYAVY QSQANQLTLQ
ANSGVKVCVI DSGLDRSNPD FLWQNITGDN DPGTGNWDQN GGPHGTHVAG TIGAADNGFG
VVGMAPGVDM HIIKVFNANG WGYSSDLALA TEKCAAAGAN IINMSLGGGR PNSTEENAFK
EFTKNGGLVI AAAGNDGNNV RTYPAGYESV MMIGANNAND AIADFSQFPA CTIIYSGKGN
KNNQQIIDTT CVEVTAGGVD TLSTYPADMA VASVLNADGQ VLGSTGMGYA EQGNVTGSGY
YMGLGKAIDS GADGKVCLID RGEISFNDKV MNCQASGGIA AVIINNVAGM LYGTLGADTT
TGIPAVGATL EDRSAILAAT SVGVEISSSD YGFMSGTSMA TPAVSGLAAL LWSNHPECSG
NDIRAALKAT AFDAGATGRD DYFGYGIVKV ADAHQYLLSN HCSAKPMVDI QLTTATYSGK
RGEQVELNWS GASTRKVNVF RNGVVITATA NDGNFVDTLN NPYGIYTYQI CEDGTANCSD
ISSVTFN
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