| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1843 |
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| Symbol | aspS |
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| ID | 4604093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2243378 |
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| End bp | 2245153 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781219 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_927718 |
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| Protein GI | 119774978 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.986528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.35056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGTC ATTATTGTGG AGACGTTAAT AAGTCTCACG TCGGACAAGA AGTCACCCTC
GTTGGCTGGG TAAACCGCAG CCGCGATTTG GGGGGTGTGA TCTTTTTGGA TCTTCGCGAC
CGCGAAGGTT TGGTTCAGGT AGTATATGAC CCGGACTTGC CAGACGTGTT TGACGTAGCC
AGCAGCCTGC GTGCCGAGTT CTGTGTTCAG GTGAAAGGTG TGGTTCGCCC ACGTCCTGAC
AGCCAGGTGA ACAGCCAGAT GAAAACCGGT GAAATTGAGG TGCTGGGTAA AGCGCTCACC
ATCATCAATG CCGCCGACCC GCTGCCACTG AGCCTGGATA ACCACCAGAA CAACAGCGAA
GAAGCCCGTC TGAAGTACCG CTATCTGGAT CTGCGCCGTC CTGAAATGGC ACAGCGTCTG
ATTTTCCGTG CCAAGGTCAC CAGCTTTGTG CGTCGCTTTA TGGATGGCAA CGGCTTCCTC
GACATTGAAA CCCCTATCCT GACCAAGGCC ACTCCGGAAG GTGCCCGCGA CTATCTGGTG
CCAAGCCGTA CCTATAAAGG TCAGTTCTTC GCACTGCCAC AGTCGCCACA GCTGTTCAAA
CAGCTGCTGA TGATGTCAGG TTTTGACCGT TACTATCAAA TCGTCAAGTG TTTCCGCGAC
GAAGACCTGC GCGCCGACCG TCAGCCTGAA TTCACCCAAA TCGATATCGA AACCTCGTTC
ATGACCTCAG ATCAGGTGAT GGAAACCACC GAGCGTATGA TCCGTAACCT GTTCCTCGAG
CTGATGAACG TGGATCTGGG TGATTTCCCG AAAATGACCT GGGATGAAGC CATGCGCCGC
TTTGGCTCCG ACAAACCTGA TCTACGTAAC CCGCTGGAAC TGGTTGATGT AGCCGATCTG
CTTAAAGCCG TTGAGTTTGC GGTATTCTCC GGCCCTGCCA ACGATGAAGA AGGCCGCGTT
GCTGCCCTGC GTATCCCCGG CGGCGCCGAG CTGTCACGCA AGCAAATCGA CGACTACACC
AAGTTTGTAG GAATCTACGG TGCCCGCGGT CTGGCCTGGA TGAAGGTCAA CAACCTGGCT
GCTGGCGTTG AAGGCATTCA GTCACCTGTG GCTAAGTTCC TGAATGAAGA CATCATCAAG
GAAATCATTG CCCGCACCAA GGCTGCCGAT GGCGATATCA TCTTCTTCGG TGCTGACAAG
GCCAACGTGG TTGCCGAGTC CATGGGCGCC CTGCGTCTGA AAGCCGGCGA AGACTTCAAA
CTGCTCGAAG GTGAGTGGCG CCCACTGTGG GTGGTTGACT TCCCGATGTT CGAAAAGGCC
GATGGCCGTT TCTACGCAGT TCACCATCCC TTTACCGCGC CGCGCGGCGT CACTGCTGCC
GAGCTTGAAG CGAGCCCAGG CAAGGCCGTG TCCGATGCCT ACGACATGGT ACTCAACGGC
GTTGAGCTGG GCGGCGGCTC TGTGCGTATC CACAATGGCG ACATGCAGTC TACCGTGTTC
CGTATCCTTG GCATCGACGA TGAAGAAGCC AAAGAAAAGT TCGGCTTCCT GCTGGACGCA
CTGCGTTTCG GTACCCCACC ACACGCGGGT CTGGCCTTTG GTCTGGACCG TCTGGTGATG
CTGATGACCG GCGCCAGCTC CATCCGTGAT GTGATGGCCT TCCCCAAGAC CACCACGGCG
GCCTGTCCGC TCACCAACGC GCCGGGACAT GCCAACCCCG ACCAACTGGT GGAACTGGGC
ATTGCGGTTC TGCCGAAAGA GCCGAAACAA GACTGA
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| Protein sequence | MRSHYCGDVN KSHVGQEVTL VGWVNRSRDL GGVIFLDLRD REGLVQVVYD PDLPDVFDVA
SSLRAEFCVQ VKGVVRPRPD SQVNSQMKTG EIEVLGKALT IINAADPLPL SLDNHQNNSE
EARLKYRYLD LRRPEMAQRL IFRAKVTSFV RRFMDGNGFL DIETPILTKA TPEGARDYLV
PSRTYKGQFF ALPQSPQLFK QLLMMSGFDR YYQIVKCFRD EDLRADRQPE FTQIDIETSF
MTSDQVMETT ERMIRNLFLE LMNVDLGDFP KMTWDEAMRR FGSDKPDLRN PLELVDVADL
LKAVEFAVFS GPANDEEGRV AALRIPGGAE LSRKQIDDYT KFVGIYGARG LAWMKVNNLA
AGVEGIQSPV AKFLNEDIIK EIIARTKAAD GDIIFFGADK ANVVAESMGA LRLKAGEDFK
LLEGEWRPLW VVDFPMFEKA DGRFYAVHHP FTAPRGVTAA ELEASPGKAV SDAYDMVLNG
VELGGGSVRI HNGDMQSTVF RILGIDDEEA KEKFGFLLDA LRFGTPPHAG LAFGLDRLVM
LMTGASSIRD VMAFPKTTTA ACPLTNAPGH ANPDQLVELG IAVLPKEPKQ D
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