| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1842 |
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| Symbol | |
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| ID | 4604092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2242508 |
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| End bp | 2243254 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639781218 |
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| Product | hypothetical protein |
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| Protein accession | YP_927717 |
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| Protein GI | 119774977 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.302719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGTC ACAGCAAGTG GGCCAACATC AGGCACCGTA AAGCCGCCCA GGATGCCAAG
CGCGGCAAAC TCTTTACCAA ACTCATTCGC GAGCTGGTTG TCTCCGCCCG TGAGGGTGGT
TCAGATGCCG ATGCCAACCC CCGTCTGCGT GCTGCCATCG ATAAAGCCCT GTCTGCCAAT
ATGACCCGTG ACACTGTGGA ACGCGCGGTT AAACGCGGCT CGGGTGAACT TGATGGCGAC
AACCTGGAAA CCCTCATCTA CGAAGGCTAC GGCCCCGGCG GCACTGCTGT GATGGTCGAG
TGCATGACGG ATAATCGCAA CCGGGCGGTG ACCGGGGTGC GCAATGCCTT CAATAAGTCC
GGCGGCAACC TGGGCACAGA TGGCTCGGTG GCGTATCTCT TTACCAAACG TGGGGTGATA
AGTTTCGAGG CCGGCACAGA TGAAGACGCC ATGATGGAAG CTGCGCTCGA TGCCGGCGCC
GATGATGTCA TCATCAATGA TGATGGCAGT GCCGATGTGT ACACTACGCC TGAGGACTTT
GGCGCCGTGA AAGATGCCCT CGATGGCACC GGTTTTTCCT CGGTGAACGC CGAAGTGACC
ATGGTGCCAT CCACACGGGC CGTGCTTGAT GCCGAAACCG CTCCCAAATT CCTGCGGCTT
ATCGATCAGC TTGAAGATCA TGATGATGTG CAGGAGGTTT ACCATAACGC CGACATCCCC
GATGAGGTGA TGGAGACGCT GGAATAA
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| Protein sequence | MAGHSKWANI RHRKAAQDAK RGKLFTKLIR ELVVSAREGG SDADANPRLR AAIDKALSAN
MTRDTVERAV KRGSGELDGD NLETLIYEGY GPGGTAVMVE CMTDNRNRAV TGVRNAFNKS
GGNLGTDGSV AYLFTKRGVI SFEAGTDEDA MMEAALDAGA DDVIINDDGS ADVYTTPEDF
GAVKDALDGT GFSSVNAEVT MVPSTRAVLD AETAPKFLRL IDQLEDHDDV QEVYHNADIP
DEVMETLE
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