| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1835 |
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| Symbol | |
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| ID | 4604085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2235167 |
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| End bp | 2235865 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781211 |
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| Product | electron transport complex RsxE subunit |
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| Protein accession | YP_927710 |
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| Protein GI | 119774970 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
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| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.521191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.104999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAACT ACAAAGAAAT TGCCTGGCAA GGGCTGTGGA AAAATAACCC GGGGCTGGTG
CAGCTTTTGG GGCTTTGTCC ACTCCTTGCC GTCACAGCCA CCCTGACCAA TGCCCTTGGA
CTTGGTCTTG CCACTGTTGC CGTGTTGATT GGCTCCAACG TGCTCGTCTC TCTGGTACGT
GAATTTGTAC CCAAGGAAAT TCGCATTCCT GTGTTTGTGA TGATCATCGC TGCGCTGGTT
ACAGTAGTTC AGCTTGTTAT CAACGCCTAT GCCTACGGCC TTTACCTGTC GCTGGGGATA
TTCCTGCCGC TGATTGTGAC CAACTGCGTC ATCATCGGCC GCGCCGAAGC CTTTGCATCC
CGCAACAGCG TCGGCGCCGC CGCCTTCGAT GGCCTGATGA TGGGGACTGG ATTTACCGCC
GTGCTTGCTG TGCTCGGTGC AGTAAGGGAA ATTCTCGGTC AGGGCACCTT GTTTGATGGC
GCCGACCAGC TGCTCGGCGA CTGGGCCGCA TCCCTTCGTA TTGAGCTGTG GCATGTGGAT
AACAGCTTCC TGCTGGCCAT GCTGCCCCCC GGCGCCTTTA TCGCCATGGG ACTCCTGATT
GCCGGTAAAA ACGTTATCGA CAAGCGCCTG GAAGCGAAAA AGCCAACACC TGAAGCCGCT
CCCGCCATCA CCCGAGCCAG GATCACCAAA GTAGGCTGA
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| Protein sequence | MSNYKEIAWQ GLWKNNPGLV QLLGLCPLLA VTATLTNALG LGLATVAVLI GSNVLVSLVR
EFVPKEIRIP VFVMIIAALV TVVQLVINAY AYGLYLSLGI FLPLIVTNCV IIGRAEAFAS
RNSVGAAAFD GLMMGTGFTA VLAVLGAVRE ILGQGTLFDG ADQLLGDWAA SLRIELWHVD
NSFLLAMLPP GAFIAMGLLI AGKNVIDKRL EAKKPTPEAA PAITRARITK VG
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