Gene Sama_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1801 
Symbol 
ID4604051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2192916 
End bp2193875 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content51% 
IMG OID639781167 
ProductC32 tRNA thiolase 
Protein accessionYP_927676 
Protein GI119774936 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.313433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATG TAGTGCAAGA CGAACTTTCC AAGAAACAAA CTACCCGCCT CAACAAACTT 
CAAAAGCGAC TTCGCCGCGA AGTTGGCAGC GCTATTGCTG ATTACAACAT GATTGAAGAA
GGTGACAGAG TCATGTGCTG TCTGTCCGGT GGCAAAGACA GCTATGCCAT GCTGGATATT
CTGATCAATC TGCAGCAACG TGCCCCTGTT TCTTTTGAAA TTGTGGCCGT TAACCTGGAT
CAGAAGCAGC CAGGCTTCCC TGAGCATGTG CTGCCTGCCT ACCTTGAGAC CCTGGGTGTG
CCTTTTCATA TTCTTGAGAA AGACACTTAT TCCATCGTTA AAGACAAGAT CCCGGAAGGC
AAGACCACCT GTTCTTTGTG TTCACGCCTG CGTCGAGGCA CCCTGTATGG ATTTGCCCAG
CGGATTGGTG CCACCAAAAT TGCTTTGGGG CACCACAGGG ACGACATTAT TGAGACCCTG
TTCCTGAACA TGTTCTATGG CGGCAAAATG AAAGCCATGC CGCCCAAGCT GTTGTCGGAC
GATGGTGCCA ACGTGGTTAT CCGCCCCCTC GCCTATTGCC GCGAAAAAGA CATTGCCGAG
TATGCCGAGC TGAAGCAGTT CCCCATTATT CCCTGTAACC TCTGTGGATC TCAGGAAAAC
CTCAAGCGTG CTGCGGTAAA AGACATGCTT AAGCAGTGGG ACCGTCAGCA TCCTGGTCGT
ATTGAAACCA TCTTTACTGC CATGCAGAAT ACTGCACCTT CCCAGGGCGT CGACCGCGAG
CAATTCGACT TTGTCTCGCT CAAACAGGAT CCCAACGCGG AATTTCGCGG TGATGTAGCA
GAAGCTGATT TGCCCGCCTT TGACTTTATG GACACGGCAA ACAGTGGTCA TATCAATCTG
GACGATGCCA GCAAACGTCA GGGCACCCGC ATCGATGTGG TATCGACCTT TACCCCCTGA
 
Protein sequence
MSDVVQDELS KKQTTRLNKL QKRLRREVGS AIADYNMIEE GDRVMCCLSG GKDSYAMLDI 
LINLQQRAPV SFEIVAVNLD QKQPGFPEHV LPAYLETLGV PFHILEKDTY SIVKDKIPEG
KTTCSLCSRL RRGTLYGFAQ RIGATKIALG HHRDDIIETL FLNMFYGGKM KAMPPKLLSD
DGANVVIRPL AYCREKDIAE YAELKQFPII PCNLCGSQEN LKRAAVKDML KQWDRQHPGR
IETIFTAMQN TAPSQGVDRE QFDFVSLKQD PNAEFRGDVA EADLPAFDFM DTANSGHINL
DDASKRQGTR IDVVSTFTP