| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1800 |
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| Symbol | |
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| ID | 4604050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2191915 |
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| End bp | 2192847 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781166 |
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| Product | universal stress protein UspE |
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| Protein accession | YP_927675 |
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| Protein GI | 119774935 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.846071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.320472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGAAT ATAAAAAGTT ACTGGTCGTT GTTGACCCTA CCAAAGACAA GCAGCCTGCT
CTGGAGCGCG CTGTTGCGCT TGCCGAAAAG AACCAGGCCT CGATTACCGT TTTCCTGTCC
ATTTTTGATT TTTCCTACGA GATGACATCC ATTTTGTCGG CTCACGAGCG TGAAGCCATG
CGTAAAGGTG TTATCGACCA GCGTGTTGCC TGGCTTGGTG ACCTGATTGC GCCTTTTATC
CAGGATGGCA TTGATATCCA AACCCAGGTT GTTTGGCACA ACCGCCCGTT TGAAAGCATC
ATCAATTATG CCATTGAAGG TGGTTTTGAC CTGATTGTGA AAGGCACTCA CGAGCACGAC
AAACTCAAAG CCGTTATCTT CACCCCCACC GACTGGCACC TGATGCGTAA AGCACCTGTT
CCCGTGTTGC TGGTGAAAGA GCACGACTGG CCTGTTGGGG GCAAAATCCT TTGTGCCGTA
AACGTCGCAA CGGAAGATCC AGAGCACCAG GCGCTTAACG GCAAAGTCAT AGAGTACGCA
CAGAACCTGG CTGCTCAGTT TGATGCCAAA GTACATTTGG TCAACGGCTA TCCAGGTACA
CCGGTCAACC TCGCCATCGA ACTGCCTGAC TTCGACGCCC ACAGCTATAA CGAGTCCATT
CGCATGCAAC ATGAGCAGCG GGTGCAGTAT CTGGCAACGA GTTATGGCAT TCCTGTTGAG
GCTTGCCATG TCAAAGAAGG CTTACCAGAA GACGTTATCC CCGAGCTTGC AGTGGATCTC
GATGCAGAGC TGGTAATTTT AGGTACCGTC GGGCGTACCG GCCTCTCCGC CGCGCTTATC
GGCAACACTG CCGAGCACGT CATCGACAGC CTTAACTGTG ACCTGCTTGC CATCAAACCC
GATGGATATA AATCACCGCT TCAGGAAGGC TAA
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| Protein sequence | MKEYKKLLVV VDPTKDKQPA LERAVALAEK NQASITVFLS IFDFSYEMTS ILSAHEREAM
RKGVIDQRVA WLGDLIAPFI QDGIDIQTQV VWHNRPFESI INYAIEGGFD LIVKGTHEHD
KLKAVIFTPT DWHLMRKAPV PVLLVKEHDW PVGGKILCAV NVATEDPEHQ ALNGKVIEYA
QNLAAQFDAK VHLVNGYPGT PVNLAIELPD FDAHSYNESI RMQHEQRVQY LATSYGIPVE
ACHVKEGLPE DVIPELAVDL DAELVILGTV GRTGLSAALI GNTAEHVIDS LNCDLLAIKP
DGYKSPLQEG
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