Gene Sama_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1795 
Symbol 
ID4604045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2187258 
End bp2187737 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content49% 
IMG OID639781161 
Producthypothetical protein 
Protein accessionYP_927670 
Protein GI119774930 
COG category[S] Function unknown 
COG ID[COG3198] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.390885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.104999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGC AGCAAGCCTG GTATAAGCAG TTCTGGCCCT GGTTTTTAAT TATCCTTCCC 
ATGTGCGCCG TGATCGCAAG TTTTGCCACC CTGAAAATTG CCATGGATAA CTCTGATTCG
TTGGTAGCCG AGGAATATTA CAAAAAGGGC AAGGCCATCA ATATGGACCT GTCTAAAATC
CAATATGCGC GCCAGATTGG TATGCAGTTT TTGGTCTCGG TTAACGATGG CGCCATCACC
CTCGAGCAGC ATGGCGGCCC AGCCTATGAC GCCGCGCTCA ATACCAGCTT TTATCACCCT
ACCCTTGCCG ATCGCGATTT TGCCGGTCTG CTTACCCAGG ATGCAACCAA GCTTTATCGT
ATTATTCCTT CACAACCAAT TTCAGGTTTT TGGGAAGTTC GCATTGAGAG TTTCGATGGC
AAGTGGCGAC TGCAAAAGCG TCTGGAACTT GCTGAGGGCA AAGAGCACTG GCTGAACTGA
 
Protein sequence
MNEQQAWYKQ FWPWFLIILP MCAVIASFAT LKIAMDNSDS LVAEEYYKKG KAINMDLSKI 
QYARQIGMQF LVSVNDGAIT LEQHGGPAYD AALNTSFYHP TLADRDFAGL LTQDATKLYR
IIPSQPISGF WEVRIESFDG KWRLQKRLEL AEGKEHWLN