Gene Sama_1775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1775 
Symbol 
ID4604025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2170764 
End bp2171138 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content50% 
IMG OID639781141 
Productcamphor resistance protein CrcB 
Protein accessionYP_927650 
Protein GI119774910 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0239] Integral membrane protein possibly involved in chromosome condensation 
TIGRFAM ID[TIGR00494] crcB protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00911899 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00720449 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAACG TGCTCTATAT TGCCGCGGGA GGTGCTATAG GTGCAGTTTT GCGCTATTCC 
ATCTCGATTC TTGCGTTACA ACTCTTTGGC ACCGGATTTC CTTTTGGTAC ACTCATCGTC
AACGTGGCGG GATCCTTTTT AATGGGATGC ATATACGCCC TGGCGGAGCT CAGCCATATT
GGTCCTGAGT GGAAAGCCCT GATTGGTGTT GGCCTTCTGG GTGCTTTAAC GACGTTTTCC
ACCTTCTCAA ACGAAACCTT GCTGCTGTTG CAGCAGGGTG AACTTGTGAA GGCGAGCCTG
AATGTGCTTC TGAACCTGAT ACTTTGCCTG ACCGTGGTGT ATCTAGGGCA GCAGCTGATT
TATTCCCGCG TTTAA
 
Protein sequence
MNNVLYIAAG GAIGAVLRYS ISILALQLFG TGFPFGTLIV NVAGSFLMGC IYALAELSHI 
GPEWKALIGV GLLGALTTFS TFSNETLLLL QQGELVKASL NVLLNLILCL TVVYLGQQLI
YSRV