| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1758 |
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| Symbol | |
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| ID | 4604008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2150332 |
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| End bp | 2151948 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639781122 |
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| Product | hypothetical protein |
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| Protein accession | YP_927633 |
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| Protein GI | 119774893 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.534399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00888717 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAAGTCCA TTGGTTTGAA TCGGTTCACT TTTTTTATAG CCCTGTATTA CGCAGCGATC
CTGAACATTC CCCTGTATAT CAGGGCGGCA GAAGGGCTGA AGTCATTGTC ACACATCGAT
TGGTTGTTTG TAGCAAGCTT ACCTGTACTG CTGACATCCT TACTGGCACT CATCTTCTCG
CTTTTCAGTG TTAAGTACCT CGTAAAACCT TTTTTTATCC TGCTGACGTT GGTTTCGGCG
TTGGTCGTCT TTGGCATGTA TAAATACGGT ATCGTGTTTG ACCGTGCCAT GATGGAAAAC
ATCTTTGAAA CCCACAGCGC CGAAGCGTTC ATGTATCTCA ATACAGAGTC CGTGGTTGGC
TTTTTACTGC TTGGGATACT GCCGGCGTTT CTTATTGCCA AAGTTAAAAT TGAATATCGG
GTCTGGTGGA AAGAGCTGCT GGTTAAGTCT GGCTTCATGC TGGGAATGGT ATCGATTGCC
GGTGGTGTGC TTGCCGGTTA CTACCAGGAC TATGTCGCCT TTGGGCGAAA TAATGATGAT
ATGAAACAAC TGGTTGTACC TACCTATTAC ATAGGCGCGG CGGCAGGGTT CGTGAATCAG
CGTTATATTG AAACGCCGTT GGAATATCAG CCCCTTGGGA CAGATGCCAA CAACCAAACC
CGGGACAGCA ATCAAAAACC CCTGTTAACC GTGCTGTTGG TCGGGGAAAC CGCCCGTTCA
ATGAATTATC AGTATTATGG CTATCAAAAA GATACCAATG CGTTTACCAA GCCCCACAAT
CCCATTGTAC TGAGCGCGAC CCGGTCATGT GGTACCGCAA CAGCACAATC CTTACCCTGT
ATGTTCTCCC GTATGGGCAG GGAAGACTAC AATGCGAGAA AAGCCAGAGC CCAGGATACC
GTAATCGATG TACTCGATCA TGCCGGTGTG ACTGTGTATT GGATTGATAG TGACAGTGGT
TGTAAGGGTG TTTGTGATCG GGTAATCAAC GAAACAGTCA AGCTGGATGA GGATCCCGCT
CTGTGTGATG GCGAGTCTTG TCTGGATCAA GTCCTTTTGA ATCGTCTCGA TAACATACTG
GCGAGTCCCA TTGAAAAAGA CACCCTATTG GTGCTGCATA TTATGGGCAG CCATGGACCT
ACGTACTTCC AGCGCTATCC GGACGAACAT AAAGCCTTCA CGCCAGATTG CCCACGCAGT
GATATTCAAA ACTGCAGTAA CGAGGCGCTC GTAAATACCT ACGACAACAC CATCCGTTAC
AGTGACTACA TCATGGCGGA GGTGATTAAT AGACTGAAAC AGCAAGAGCC AGTGGCCGAT
ACTGCGATGA TGTATATCTC AGATCATGGA GAGTCTCTGG GCGAAAAGGG CTTGTACCTG
CATGGTGCGC CCTATGCATT TGCACCCATC GAGCAAATCA GTGTGCCCTG GCTGTTGTGG
CTATCTGACG GTTTTAAAGA AGAAAACCGC CTGGATGAAA GCTGTTTAAG GAGCTTGCAG
GGCGAATGGT CCCATGACAA TCTATTTGAT AGCTTGTTGG GGTGGATGAA TATTCACACC
AGCATATATC GCAAGGAGCT GGATATTTTC AGTCGCTGTC GACTTCCGGC GGTATAA
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| Protein sequence | MKSIGLNRFT FFIALYYAAI LNIPLYIRAA EGLKSLSHID WLFVASLPVL LTSLLALIFS
LFSVKYLVKP FFILLTLVSA LVVFGMYKYG IVFDRAMMEN IFETHSAEAF MYLNTESVVG
FLLLGILPAF LIAKVKIEYR VWWKELLVKS GFMLGMVSIA GGVLAGYYQD YVAFGRNNDD
MKQLVVPTYY IGAAAGFVNQ RYIETPLEYQ PLGTDANNQT RDSNQKPLLT VLLVGETARS
MNYQYYGYQK DTNAFTKPHN PIVLSATRSC GTATAQSLPC MFSRMGREDY NARKARAQDT
VIDVLDHAGV TVYWIDSDSG CKGVCDRVIN ETVKLDEDPA LCDGESCLDQ VLLNRLDNIL
ASPIEKDTLL VLHIMGSHGP TYFQRYPDEH KAFTPDCPRS DIQNCSNEAL VNTYDNTIRY
SDYIMAEVIN RLKQQEPVAD TAMMYISDHG ESLGEKGLYL HGAPYAFAPI EQISVPWLLW
LSDGFKEENR LDESCLRSLQ GEWSHDNLFD SLLGWMNIHT SIYRKELDIF SRCRLPAV
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