Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1757 |
Symbol | |
ID | 4604007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2148076 |
End bp | 2150166 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639781121 |
Product | prolyl oligopeptidase |
Protein accession | YP_927632 |
Protein GI | 119774892 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1505] Serine proteases of the peptidase family S9A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0107679 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAC GGATACTGCT TCTTGGCGCA GCCTCATTGC TGGCTTTCAA TGCTGTAGCA CAAGGGGACC CCTTCATTTG GCTGGAAGAT GTCGAGGGTG AAAAAGCGCT TGCCTGGGTC AAAACCCAAA ACGATCGCTC TCTTGCAGAG CTTAAAGCCG TCCCAGGTTA TAACGCGTTG GTGGACAATG CACTGGATAT CCTTAATGAC AAGGCGCGTA TCCCGTACGC GAGTCGCATT GGTGACCATC TCTATAACTT CTGGAAAGAC GAAGCCAATC CCCGCGGCAT TTACCGACGC ACCACCATGG CGGAATACGT TAAAGACGCG CCTAAATGGG AAACCGTGCT CGATATCGAT GCACTTGGTA AATCCGAAGG GGTGAACTGG GTATTCAAGG GCATGGACTG TCAGTATCCA AAGAATATAC GTTGCCTGGT GTCCCTTTCC CGAGGCGGTG CCGATGCAGT GGAAATCCGC GAATTTGACC TCTCAACCTT AAGTTTCGTG CCTGCCGACA AGCAGGGTTT TTTCTTGCCG GAGGCCAAGT CCAGCACAAG TTGGATTGAT GAAAACACCC TGTTTGTGGG TACCGATTTC GACGAAGGTG ACGCCTGGAC TGACTCTGGC TACCCGCGCA AGGTAAAGGT TTGGAAGCGG GGCACTGATC TGAAAGACGC CAAAGAAATT TATGCAGGCA ACAAGGCATC GGTGGCGGCA TCCGGTTACG TCATGTGGGA TGATAAAACG CCACTGCAAT TGGTATCTGA AGCCGAAACC TTCTACGAAG CCAGTTACAA GGCGCTCCTT GATGGCAAGC TGGTAGAGCT GCCGCTTCCC AAAGATGCCG AGCTCAAGGG CTTCTTCAAG GGCGATATTT TTGTTGAGCT TAAGAGTAAG CTCGAGCAGG GCAACAACAG TTTCCCACAG GGCGCCATTG TCTACACCAA GGCAGACAAG CTGCTGGCCG GAACGCCTGA GTTCGCACTC TTTGTAAAAC CCGACGCCAA TTCTTCCATC AGTCAGGTGA CCTTTAGCCG CAACGCGGTA CTGGTGAACT GGCTCGAAGA CGTGAAGAGC AAATTGGTGC GTTATCATAA AGATGCCAAA GGCCAGTGGC AGGGCGAAGA CGTTGGTTTC CCAAGCAATG GCAGCATCAG TGTGTTCGAC AGCAGCCGCG ACAGAGATGA TCTGTTCGTA ACCTATACCA GCTTCCTCGA ACCTTCGACC CTGTACAGCG TTAACGCCGA AACCCTCAAG CGAGACTCGC TCAAGGCGAT GCCTGCCCAG TTTGATGCGT CAAAGTTTGA GGCCAAGCAG TACTTTGCCA CCAGTAAAGA CGGTACCAAG GTGCCTTACT TTGCGGTGAT GGCCAAGGAC ATCAAACTCG ACAGCACCAA CCCAACCCTG CTGTATGGCT ACGGTGGTTT TGAGGTATCG CTGCGTCCTT TCTATTCTGC AACCACAGGT AAAAACTGGC TGGAGCAGGG CGGCGTTTAT GTACTTGCCA ACATTCGCGG CGGCGGTGAA TACGGTCCCG GCTGGCACCA GGCTGCATTG AAGGAAAACC GTCATAAAGC CTACGAAGAC TTTGAAGCCA TTGCTGAAGA TCTGATTAAG CGCAAAATCA CTTCCCCGAA GCATCTGGGT ATTCAGGGTG GCAGTAATGG TGGCCTGCTG ATGGGGGCTG CCTTTACCCG CAGACCCGAT TTGTACAATG CCGTGGTATG TCAGGTACCG CTTCTGGATA TGAAGCGTTA CAACAAACTG TTGGCAGGCG CCAGCTGGAT GGGCGAGTAC GGCAACCCGG ATATCGCCGC CGAATGGGAT TACATTAAAA CCTTCTCCCC ATACCATAAC CTTAAAAAAG ACGTCGAATA TCCCAAAGTA TTTTTCACCA CATCCACCCG CGATGACCGT GTGCACCCAG GCCATGCCCG TAAAATGGTG GCCAAGATGG AAGACATGGG CATTGAGGTG CTGTACTTCG AAAACATGGA AGGCGGCCAT GCCGGCGCGG CAGATAATAA ACAAACTGCG GAACTAAATA GCCTGGCATA TGCCTACTTA TTGAAGCAGC TTAAGTTGTA A
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Protein sequence | MNKRILLLGA ASLLAFNAVA QGDPFIWLED VEGEKALAWV KTQNDRSLAE LKAVPGYNAL VDNALDILND KARIPYASRI GDHLYNFWKD EANPRGIYRR TTMAEYVKDA PKWETVLDID ALGKSEGVNW VFKGMDCQYP KNIRCLVSLS RGGADAVEIR EFDLSTLSFV PADKQGFFLP EAKSSTSWID ENTLFVGTDF DEGDAWTDSG YPRKVKVWKR GTDLKDAKEI YAGNKASVAA SGYVMWDDKT PLQLVSEAET FYEASYKALL DGKLVELPLP KDAELKGFFK GDIFVELKSK LEQGNNSFPQ GAIVYTKADK LLAGTPEFAL FVKPDANSSI SQVTFSRNAV LVNWLEDVKS KLVRYHKDAK GQWQGEDVGF PSNGSISVFD SSRDRDDLFV TYTSFLEPST LYSVNAETLK RDSLKAMPAQ FDASKFEAKQ YFATSKDGTK VPYFAVMAKD IKLDSTNPTL LYGYGGFEVS LRPFYSATTG KNWLEQGGVY VLANIRGGGE YGPGWHQAAL KENRHKAYED FEAIAEDLIK RKITSPKHLG IQGGSNGGLL MGAAFTRRPD LYNAVVCQVP LLDMKRYNKL LAGASWMGEY GNPDIAAEWD YIKTFSPYHN LKKDVEYPKV FFTTSTRDDR VHPGHARKMV AKMEDMGIEV LYFENMEGGH AGAADNKQTA ELNSLAYAYL LKQLKL
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