| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1740 |
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| Symbol | |
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| ID | 4603990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2129830 |
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| End bp | 2130531 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781103 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_927615 |
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| Protein GI | 119774875 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000416133 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0025421 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAGACA AGCCCATTCT GGTTGCCCTT GATTTTGACA ACAAGTATTC AGCGTTGCAG
TTGGTTGATA AGCTCGATCC CGCCATGTGC CGCCTCAAGG TGGGCAAGGA GATGTTCACT
CTGTTTGGGC CAGAGCTGGT AAAAGACATC CAAAATCGTG GTTTCGACTT ATTCCTTGAC
CTTAAATTTC ACGATATTCC CAACACCGTG GCCAAGGCGG TTGCCGCAGC GGCTGAGCTT
GGGGTCTGGA TGGTCAACGT CCACGCATCA GGTGGTTTTG CCATGATGGA AGCGGCGCGC
AAAGCCTTGC TGCCATACGG CGACAATGCG CCGCTGTTGA TTGCCGTGAC TGTGCTTACC
TCCATGAGCG ATGAAGATCT TAAGCTTTTG GGAATCGACG TTGGTGCTGC TGAGCACGTG
AAGCGTCTTG CCAAATTAAC CCGTGACGCG GGCCTCGATG GTGTGGTGTG CTCGGCACAG
GAAGCCACTA TGCTTAAAGA ACTGTGTGGG CGCGATTTTA AACTCATTAC CCCGGGTATA
CGCCCTGAGG GGAGTGAGGC CGGCGATCAG CATCGCATCA TGACGCCCGC TCAGGCTCTG
CAAGCAGGCT CGGATTATCT GGTGATTGGT CGTCCGATCA CCAAGTCCGC AGATCCACTC
AAGACTCTGA CGGAAATTCA CCAGTCAATC CGCGGAATAT AA
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| Protein sequence | MRDKPILVAL DFDNKYSALQ LVDKLDPAMC RLKVGKEMFT LFGPELVKDI QNRGFDLFLD
LKFHDIPNTV AKAVAAAAEL GVWMVNVHAS GGFAMMEAAR KALLPYGDNA PLLIAVTVLT
SMSDEDLKLL GIDVGAAEHV KRLAKLTRDA GLDGVVCSAQ EATMLKELCG RDFKLITPGI
RPEGSEAGDQ HRIMTPAQAL QAGSDYLVIG RPITKSADPL KTLTEIHQSI RGI
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