Gene Sama_1735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1735 
Symbolcmk 
ID4603985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2125389 
End bp2126084 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content53% 
IMG OID639781098 
Productcytidylate kinase 
Protein accessionYP_927610 
Protein GI119774870 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0283] Cytidylate kinase 
TIGRFAM ID[TIGR00017] cytidylate kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.10181e-08 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value8.7686e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCTGAAA GGGCTCCAGT AGTCACTATC GACGGCCCCA GTGGTGCCGG TAAGGGTACC 
ATTGCCCATT TGCTCGCCAA ACACTATGGC TGGCAGTTAC TCGATAGCGG TGCCATTTAT
CGCGTATTGG CGTTGGCCGC GCTGCACCAT AACGTTGAAC TTGAAAACGA AGAAGCCATT
ACCTTGCTGG CCGCGCATTT GGATGTGCAG TTTCTGGCCG GAGGTGACAA AGACGCCATC
AAGGTGGTGC TCGAAGGTGA GGATGTAACT GGTGCCATTC GCACCCAGGA ATGCTCAAAT
GCGGCATCGA AAGTCGCCGC ATTCCCGCGC GTGAGGGAAG CGTTGCTGCG CAGACAGCGT
GCATTTTGTC AGGCGCCAGG GCTGATTGCC GACGGTCGTG ACATGGGCAC TGTGGTTTTT
CCAACCGCAC CTGCCAAACT TTATCTTACT GCATCTGCCG AAGAGCGGGC GCAAAGGCGC
TATAATCAGT TGCAGGACAA GGGCTTCGAT GTTAAAATCG ACCGCCTTTT GGCCGAGATC
CAAGAACGTG ATGACCGTGA TATGAATCGT CCGGTTGCCC CTTTGGTTCC TGCCGATGAT
GCCTTGGTGA TAGACACTAC AGGCATTGGC ATTGACGATG TGTTTGCCCA ATGTGTTGCT
CACATCAATG ACAAATTATC CGCTTCTGGC TTTTAA
 
Protein sequence
MSERAPVVTI DGPSGAGKGT IAHLLAKHYG WQLLDSGAIY RVLALAALHH NVELENEEAI 
TLLAAHLDVQ FLAGGDKDAI KVVLEGEDVT GAIRTQECSN AASKVAAFPR VREALLRRQR
AFCQAPGLIA DGRDMGTVVF PTAPAKLYLT ASAEERAQRR YNQLQDKGFD VKIDRLLAEI
QERDDRDMNR PVAPLVPADD ALVIDTTGIG IDDVFAQCVA HINDKLSASG F