| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1734 |
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| Symbol | |
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| ID | 4603984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2123951 |
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| End bp | 2125237 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781097 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_927609 |
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| Protein GI | 119774869 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0118133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000990947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGACCAAT TACGTCTTGA GCCCGTATCC CGGGTCAACG GGGTGGTTAA CATCCCCGGT
TCCAAAAGCA TCTCCAACCG CGCATTGCTG TTGGCAACCC TGGCAAGTGG CGAAACCACT
CTGGTAAATC TGCTGGATTC TGATGATATC CGCCATATGC TAAACGCGCT CAAAAGCCTG
GGCGTTAATT TCACCTTGTC TGATGACAAG ACGGTGTGTA CGCTCAATGG CCTCGGTGGT
CCTATCCAAA CAGATAAGGC CTTTGAGCTG TTTTTAGGTA ACGCCGGCAC GGCGATGCGA
CCCCTGTGCG CCGCGCTGAC TCTGGGGACC GGGGAATTTA CCCTGACCGG TGAGCCGCGC
ATGGAAGAGC GCCCCATTGG CGATCTGGTG GATGCGCTGC GTCAGCTTGG CGCCGATATC
CGTTACCTTA AAAATGATGG CTTCCCGCCA CTCACCATCA ATGCCACCGG GCTTGCGGGC
GGCGTGGTGG AAATAGATGG TAGCCTCTCC AGCCAGTTTC TGACTGCGCT GCTCATGGTG
GCACCCCTTG CCAAGGGAGC TGTGACCATT GCCGTAAAAG GTGAGCTCGT TTCCAAACCT
TACATCGATA TCACCCTGGA TTTGATGGCC AAATTTGGGG TGACAGTCGT CAATGACAAC
TATCAGCGCT TCGAGATTGC ATCAGGGCAA CACTATGTGT CGCCCGGCAA GGTGCTGGTT
GAAGGGGACG CGTCATCTGC GTCTTACTTC CTTGCGGCCG GTGCTATTGG CGGCGGTGAA
GTGAAAGTCA CCGGCGTTGG CCGTTTGGCG GTGCAGGGCG ATGTGAAATT TGCCGATGCC
CTGGCGGCTA TGGGAGCAGA TATTGAATGG GGCGAAGATT ACATTATCGC CAGAGGCAGT
AAGCTTCACG GTATCGACAT GGACATGAAC CACATTCCCG ATGCGGCCAT GACCATTGCC
ACCGCGGCGC TGTTTGCCGA AGGCACCACC CGGATGAGCA ACATCTACAA TTGGCGCATC
AAGGAAACCG ACCGTCTTGC CGCCATGGCG ACTGAGCTTC GAAAAGTCGG CGCCAAAGTG
GAAGAGGGGC ACGATTACAT CCAGATCACA CCGCCGGTCA AACCAGTTCA TGCCGAAATC
GATACCTATA ACGATCACCG CATGGCGATG TGTTTTTCAC TGCTGGCGTT TGCCGATTGC
GGGGTGACCA TTAACGATCC TGGCTGTACC TCAAAAACAT TTCCGGATTA TTTCAATCGC
TTCGCTAACT TAGCTAAGCC GGATTGA
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| Protein sequence | MDQLRLEPVS RVNGVVNIPG SKSISNRALL LATLASGETT LVNLLDSDDI RHMLNALKSL
GVNFTLSDDK TVCTLNGLGG PIQTDKAFEL FLGNAGTAMR PLCAALTLGT GEFTLTGEPR
MEERPIGDLV DALRQLGADI RYLKNDGFPP LTINATGLAG GVVEIDGSLS SQFLTALLMV
APLAKGAVTI AVKGELVSKP YIDITLDLMA KFGVTVVNDN YQRFEIASGQ HYVSPGKVLV
EGDASSASYF LAAGAIGGGE VKVTGVGRLA VQGDVKFADA LAAMGADIEW GEDYIIARGS
KLHGIDMDMN HIPDAAMTIA TAALFAEGTT RMSNIYNWRI KETDRLAAMA TELRKVGAKV
EEGHDYIQIT PPVKPVHAEI DTYNDHRMAM CFSLLAFADC GVTINDPGCT SKTFPDYFNR
FANLAKPD
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