| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1733 |
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| Symbol | |
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| ID | 4603983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2122290 |
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| End bp | 2123480 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781096 |
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| Product | aromatic amino acid aminotransferase |
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| Protein accession | YP_927608 |
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| Protein GI | 119774868 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.162633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000702513 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTGAGC ATCTTTCGGC GTTGCCTGCC GATCCTATCC TGGGTCTTTT AACCAAATAC
CGTGAAGACA GCCACCCACA CAAAGTCGAC CTGGGCGTGG GTGTGTATAA AGATCCCGCC
GGAAACACGC CTATTCTGAA TTGTGTGAAG ACCGCCGAGA CGCTGCGCAC TTCCACTGAA
ACCACCAAGG TCTATATCGG TCCTACCGGT TCAGCGCCCT TTAACGAATT GATGAACGAG
CTGGCTTTCG GTGCAGATCA TGCCGTGGTT CAGGCACGCC GCATTCGCAC AGTATCGACC
CCTGGCGGAA CCGGCGCCCT GCGCGTAGCC GCTGAATTCA TCGCCAAATG TAAACCCGGC
GCCACCATTT GGGTGAGTGA CCCCACCTGG GCAAACCACA CAGGGCTGTT TCAGGCCGCA
GGCTTAACGG TCAAAACCTA TCCCTACTAC GATTACGACA ACAAGTGCCT GAAATTTAAT
GAAATGCTTG CGGCGCTTAA GCAAGTTGGC GCCGAAGACG CTGTACTGCT GCACGCCTGC
TGCCATAACC CATCCGGTCA GGACTTAAGT ACCGCCCAGT GGGATGCCGT GGTCGAGGTT
GCCAAAGACA AAGGCTTCCT GCCCTTTATC GACATGGCTT ATCAGGGCTT TGGTGATGGC
GTGGATGAAG ATGCCTACGG GGTGCGCGCC ATGGCAGCTG CTGTCGATAA CATGGTGCTC
GCCTCTTCCT GCTCGAAGAA CTTTGGTCTA TACCGCGAGC GCATCGGTGC CTGCTCCATC
ATAGGTAAAG ACAGTGCCCA GGCAGATGTG TCGCTGTCGG TACTGCTGTA TGTGGTGCGC
TGCATCTACT CAATGCCACC GGCCCACGGC GCCGCCATTG TGGAAACCAT TCTGGGCTCA
AACGAGCTCA AGGCCCAATG GCTGGATGAG CTTAAAGTGA TGCGCGATCG CATCAACGGC
AACCGCGCCA TGCTGGTAGA TAAACTGCAC GCACTTGGCA CCAACCGCGA CTTTTCCTTT
ATCGCCCGCC AAAAAGGCAT GTTCTCCTTC CTTGGCATCA GTGAGGCTCA GGTAAACACC
CTGATGAAGG ACTACAGCAT TTACATGGTG GGCTCTAGCC GCATAAGCAT TGCCGGTATA
AGCGAAGAAA ACGTGGATTA TCTGGCCAAA TCCATTATCG CCGTGCTTTA A
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| Protein sequence | MFEHLSALPA DPILGLLTKY REDSHPHKVD LGVGVYKDPA GNTPILNCVK TAETLRTSTE
TTKVYIGPTG SAPFNELMNE LAFGADHAVV QARRIRTVST PGGTGALRVA AEFIAKCKPG
ATIWVSDPTW ANHTGLFQAA GLTVKTYPYY DYDNKCLKFN EMLAALKQVG AEDAVLLHAC
CHNPSGQDLS TAQWDAVVEV AKDKGFLPFI DMAYQGFGDG VDEDAYGVRA MAAAVDNMVL
ASSCSKNFGL YRERIGACSI IGKDSAQADV SLSVLLYVVR CIYSMPPAHG AAIVETILGS
NELKAQWLDE LKVMRDRING NRAMLVDKLH ALGTNRDFSF IARQKGMFSF LGISEAQVNT
LMKDYSIYMV GSSRISIAGI SEENVDYLAK SIIAVL
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